RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 JSRP1Q96MG2 331 aaPredicted RBP14.18□□□□□ -0.14
CD4-212ENST00000544344 UBQLN3Q9H347 655 aa14.18□□□□□ -0.14
CD4-212ENST00000544344 COPS7BQ9H9Q2 264 aaPredicted RBP14.18□□□□□ -0.14
CD4-212ENST00000544344 RTCAO00442 366 aaKnown RBP14.17□□□□□ -0.14
CD4-212ENST00000544344 TAPBPO15533 448 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 SCELO95171 688 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 HPNP05981 417 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 ATP5A1P25705 553 aaKnown RBP14.17□□□□□ -0.14
CD4-212ENST00000544344 CTSSP25774 331 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 GDF1P27539 372 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 PCSK6P29122 969 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 HPDP32754 393 aaPredicted RBP14.17□□□□□ -0.14
CD4-212ENST00000544344 KCNC1P48547 511 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 TSNQ15631 228 aaKnown RBP14.17□□□□□ -0.14
CD4-212ENST00000544344 NTRK2Q16620 822 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 Q5PR19 223 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 DCST1Q5T197 706 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 CCDC137Q6PK04 289 aaKnown RBP14.17□□□□□ -0.14
CD4-212ENST00000544344 DND1Q8IYX4 353 aaKnown RBP14.17□□□□□ -0.14
CD4-212ENST00000544344 ACOT4Q8N9L9 421 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 FAM13CQ8NE31 585 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 SPATA3Q8NHX4 192 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 DOK4Q8TEW6 326 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 HSPBAP1Q96EW2 488 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 FBXL20Q96IG2 436 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 KCNC2Q96PR1 638 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 TMEM79Q9BSE2 394 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 YIPF4Q9BSR8 244 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 DOHHQ9BU89 302 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 EHD1Q9H4M9 534 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 GPRC5BQ9NZH0 403 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 SLC6A5Q9Y345 797 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 IKBKGQ9Y6K9 419 aa14.17□□□□□ -0.14
CD4-212ENST00000544344 ANKRD33BA6NCL7 494 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 EEF1E1-BLOC1S5C9J1V9 151 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 H7C1Q1 480 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 EEF1E1O43324 174 aaKnown RBP14.16□□□□□ -0.14
CD4-212ENST00000544344 ACSL3O95573 720 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 IL18BPO95998 194 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 EPORP19235 508 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 OPRM1P35372 400 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 SOX18P35713 384 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 CDK9P50750 372 aaKnown RBP14.16□□□□□ -0.14
CD4-212ENST00000544344 DOC2AQ14183 400 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 NHSL2Q5HYW2 709 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 BICRALQ6AI39 1079 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 ZNF662Q6ZS27 426 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 CXXC5Q7LFL8 322 aaKnown RBP14.16□□□□□ -0.14
CD4-212ENST00000544344 PM20D2Q8IYS1 436 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 NKAPQ8N5F7 415 aaKnown RBP14.16□□□□□ -0.14
CD4-212ENST00000544344 C9orf106Q8NAJ2 232 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 BBOF1Q8ND07 529 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 SMPDL3BQ92485 455 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 ZNF592Q92610 1267 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 NTNG2Q96CW9 530 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 WDYHV1Q96HA8 205 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 MS4A14Q96JA4 679 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 ZNF597Q96LX8 424 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 DACH2Q96NX9 599 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 TRIB1Q96RU8 372 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 TBCDQ9BTW9 1192 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 MS4A8Q9BY19 250 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 UGT2B28Q9BY64 529 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 LZTFL1Q9NQ48 299 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 ADAM21Q9UKJ8 722 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 PSAT1Q9Y617 370 aa14.16□□□□□ -0.14
CD4-212ENST00000544344 EXPH5Q8NEV8 1989 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 ARHGEF9O43307 516 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 CLPSP04118 112 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 COX7A2P14406 83 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 BMP7P18075 431 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 HIST1H1TP22492 207 aaPredicted RBP14.15□□□□□ -0.14
CD4-212ENST00000544344 SERPINB3P29508 390 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 GGT5P36269 586 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 MSH2P43246 934 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 SLCO1A2P46721 670 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 TAS2R39P59534 338 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 TGM3Q08188 693 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 FOXF2Q12947 444 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 TGFBIQ15582 683 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 FBXO48Q5FWF7 155 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 TMEM64Q6YI46 380 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 SYDE1Q6ZW31 735 aaPredicted RBP14.15□□□□□ -0.14
CD4-212ENST00000544344 LRRC75A-AS1Q8N1F1 130 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 SPC24Q8NBT2 197 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 ESAMQ96AP7 390 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 DGAT2Q96PD7 388 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 NAT9Q9BTE0 207 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 REPIN1Q9BWE0 567 aaKnown RBP14.15□□□□□ -0.14
CD4-212ENST00000544344 CAPS2Q9BXY5 557 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 ROGDIQ9GZN7 287 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 WWTR1Q9GZV5 400 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 PPANQ9NQ55 473 aaKnown RBP14.15□□□□□ -0.14
CD4-212ENST00000544344 GALNT8Q9NY28 637 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 CAMK2AQ9UQM7 478 aa14.15□□□□□ -0.14
CD4-212ENST00000544344 MXRA5Q9NR99 2828 aa14.14□□□□□ -0.15
CD4-212ENST00000544344 NCF1BA6NI72 391 aaPredicted RBP14.14□□□□□ -0.15
CD4-212ENST00000544344 NCF1CA8MVU1 366 aaPredicted RBP14.14□□□□□ -0.15
CD4-212ENST00000544344 TRAPPC6AO75865 159 aa14.14□□□□□ -0.15
CD4-212ENST00000544344 NCF1P14598 390 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms