RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SPEGQ15772 3267 aa14.28□□□□□ -0.12
CHFR-223ENST00000544268 A0A0B4J203 849 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 PNMA8CA0A1B0GUJ8 204 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 A0A1W2PQ72 361 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 C12orf71A8MTZ7 269 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 AP3D1O14617 1153 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 SSX4O60224 188 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 PSIP1O75475 530 aaKnown RBP14.27□□□□□ -0.12
CHFR-223ENST00000544268 PCDH8O95206 1070 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 MT-ND2P03891 347 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 PRKACAP17612 351 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 DRD1P21728 446 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 DPTQ07507 201 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 CCNJQ5T5M9 372 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 FIP1L1Q6UN15 594 aaKnown RBP14.27□□□□□ -0.12
CHFR-223ENST00000544268 PLA2G15Q8NCC3 412 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 SETD9Q8NE22 299 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 OR52J3Q8NH60 311 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 OR5AK3PQ8NH89 298 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 SLC38A4Q969I6 547 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 TMEM159Q96B96 161 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 AMBNQ9NP70 447 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 KLHL42Q9P2K6 505 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 PCM1Q15154 2024 aa14.27□□□□□ -0.12
CHFR-223ENST00000544268 A0A0X1KG70 313 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 GNG14A0A1W2PPG7 69 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 SHISA7A6NL88 538 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 SNTNA6NMZ2 147 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 A8MV72 311 aaPredicted RBP14.27□□□□□ -0.13
CHFR-223ENST00000544268 M0R129 80 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 AP2A2O94973 939 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 FADS2O95864 444 aaKnown RBP14.27□□□□□ -0.13
CHFR-223ENST00000544268 TGFB1P01137 390 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 SEMG1P04279 462 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 FABP3P05413 133 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 GPX2P18283 190 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 CD72P21854 359 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 PRIM2P49643 509 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 AP1S2P56377 157 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 RFX4Q33E94 735 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 IQCCQ4KMZ1 466 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 LSRQ86X29 649 aaPredicted RBP14.27□□□□□ -0.13
CHFR-223ENST00000544268 HIPK1Q86Z02 1210 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 PHOX2BQ99453 314 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 OR51B5Q9H339 312 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 ZBTB20Q9HC78 741 aaPredicted RBP14.27□□□□□ -0.13
CHFR-223ENST00000544268 PLAGL1Q9UM63 463 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 SAMD4AQ9UPU9 718 aaKnown RBP14.27□□□□□ -0.13
CHFR-223ENST00000544268 PEX16Q9Y5Y5 336 aa14.27□□□□□ -0.13
CHFR-223ENST00000544268 TEX51A0A1B0GUA7 166 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 LOC110117498-PIK3R3F6TDL0 507 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 SCAMP2O15127 329 aaKnown RBP14.26□□□□□ -0.13
CHFR-223ENST00000544268 RGS10O43665 173 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 VIPP01282 170 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ETFAP13804 333 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 MAPK1P28482 360 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ETV6P41212 452 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 DGKEP52429 567 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 TAGLNQ01995 201 aaKnown RBP14.26□□□□□ -0.13
CHFR-223ENST00000544268 CDKL4Q5MAI5 379 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ZNF517Q6ZMY9 492 aaPredicted RBP14.26□□□□□ -0.13
CHFR-223ENST00000544268 RAB43Q86YS6 212 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 RASGRP3Q8IV61 690 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ATG16L2Q8NAA4 619 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 WDR48Q8TAF3 677 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 GANCQ8TET4 914 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ZNF480Q8WV37 535 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 FCRL1Q96LA6 429 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 IL17FQ96PD4 163 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 CDX2Q99626 313 aaPredicted RBP14.26□□□□□ -0.13
CHFR-223ENST00000544268 IER2Q9BTL4 223 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 CDADC1Q9BWV3 514 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 CCNB1IP1Q9NPC3 277 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 RLIMQ9NVW2 624 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 C1orf226A1L170 272 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 OR2A25A4D2G3 310 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 AIREO43918 545 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ITGA2P17301 1181 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 BNC1Q01954 994 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 SP140Q13342 867 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 BCL7AQ4VC05 210 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 LIPJQ5W064 366 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 CFAP206Q8IYR0 622 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 TTC29Q8NA56 475 aaPredicted RBP14.26□□□□□ -0.13
CHFR-223ENST00000544268 GALNT6Q8NCL4 622 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 FERD3LQ96RJ6 166 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 OR2AG1Q9H205 316 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 THUMPD1Q9NXG2 353 aaKnown RBP14.26□□□□□ -0.13
CHFR-223ENST00000544268 SLC6A14Q9UN76 642 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 ORC6Q9Y5N6 252 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 COL6A3P12111 3177 aa14.26□□□□□ -0.13
CHFR-223ENST00000544268 SLC5A10A0PJK1 596 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 PRR23AA6NEV1 266 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 PRAMEF25A6NGN4 478 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 DBTP11182 482 aaKnown RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 ITGAMP11215 1152 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 IL7P13232 177 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms