RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MARVELD2Q8N4S9 558 aa12.91□□□□□ -0.34
HCFC2-202ENST00000544223 AMER2Q8N7J2 671 aa12.91□□□□□ -0.34
HCFC2-202ENST00000544223 OR9A4Q8NGU2 314 aa12.91□□□□□ -0.34
HCFC2-202ENST00000544223 RERGQ96A58 199 aaPredicted RBP12.91□□□□□ -0.34
HCFC2-202ENST00000544223 ZBED6CLQ96FA7 236 aaPredicted RBP12.91□□□□□ -0.34
HCFC2-202ENST00000544223 CAPN10Q9HC96 672 aa12.91□□□□□ -0.34
HCFC2-202ENST00000544223 KCMF1Q9P0J7 381 aa12.91□□□□□ -0.34
HCFC2-202ENST00000544223 DNAJB9Q9UBS3 223 aa12.91□□□□□ -0.34
HCFC2-202ENST00000544223 SAMD4AQ9UPU9 718 aaKnown RBP12.91□□□□□ -0.34
HCFC2-202ENST00000544223 IGHV5-51A0A0C4DH38 117 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SUV39H1O43463 412 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 B4GAT1O43505 415 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 HS6ST1O60243 411 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 RDH16O75452 317 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 ALPLP05186 524 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 HMGN2P05204 90 aaKnown RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 CPN2P22792 545 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 PCGF2P35227 344 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SEPHS1P49903 392 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 OR1D5P58170 312 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SHC2P98077 582 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 FOXB2Q5VYV0 432 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SAXO2Q658L1 398 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 OR52E8Q6IFG1 317 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SLC48A1Q6P1K1 146 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 RBM45Q8IUH3 476 aaKnown RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SLC25A45Q8N413 288 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 ARSGQ96EG1 525 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 TMEM19Q96HH6 336 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 CCDC3Q9BQI4 270 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 ASPSCR1Q9BZE9 553 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 OR51I1Q9H343 314 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 IL1RAPQ9NPH3 570 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SCOCQ9UIL1 159 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 ADAM29Q9UKF5 820 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 CNOT11Q9UKZ1 510 aaKnown RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 A8MU76 341 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 FABP3P05413 133 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 EPHA2P29317 976 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 GSSP48637 474 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 EIF3MQ7L2H7 374 aaKnown RBP12.9□□□□□ -0.34
HCFC2-202ENST00000544223 CARM1Q86X55 608 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 CADM4Q8NFZ8 388 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 GAL3ST3Q96A11 431 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 ZG16BQ96DA0 208 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 NEURL3Q96EH8 262 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 SPACA7Q96KW9 195 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 C7orf34Q96L11 122 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 NELL2Q99435 816 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 TOR3AQ9H497 397 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 RUBCNLQ9H714 662 aa12.9□□□□□ -0.34
HCFC2-202ENST00000544223 FRKP42685 505 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 FAM111BQ6SJ93 734 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 ZCCHC7Q8N3Z6 543 aaKnown RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 FAIM2Q9BWQ8 316 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 OSBPL11Q9BXB4 747 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 IRAK4Q9NWZ3 460 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 HCN3Q9P1Z3 774 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 ZNF639Q9UID6 485 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 POMT2Q9UKY4 750 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 MAPRE3Q9UPY8 281 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 RNF215Q9Y6U7 377 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 ASCC3Q8N3C0 2202 aaKnown RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 A0A0A6YYC8 382 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 I3L1I5 382 aaPredicted RBP12.89□□□□□ -0.35
HCFC2-202ENST00000544223 SEMG1P04279 462 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 NR2F6P10588 404 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 VEZF1Q14119 521 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 IRAK1BP1Q5VVH5 260 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 ERICH5Q6P6B1 374 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 C10orf90Q96M02 699 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 CTPS2Q9NRF8 586 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 OLAHQ9NV23 265 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 DAPP1Q9UN19 280 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 CLCA2Q9UQC9 943 aa12.89□□□□□ -0.35
HCFC2-202ENST00000544223 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 OR5K4A6NMS3 321 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 TOR1BO14657 336 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 RECKO95980 971 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 PROS1P07225 676 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 DRD2P14416 443 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 ALOX12P18054 663 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 NTSP30990 170 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 RRM2P31350 389 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 XKP51811 444 aa12.88□□□□□ -0.35
HCFC2-202ENST00000544223 C21orf59P57076 290 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms