RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.82■□□□□ 0.92
CDKN3-207ENST00000543789 MS4A12Q9NXJ0 267 aa20.82■□□□□ 0.92
CDKN3-207ENST00000543789 QPCTLQ9NXS2 382 aa20.82■□□□□ 0.92
CDKN3-207ENST00000543789 HRKO00198 91 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 SAP18O00422 153 aaKnown RBP20.81■□□□□ 0.92
CDKN3-207ENST00000543789 S100BP04271 92 aaPredicted RBP20.81■□□□□ 0.92
CDKN3-207ENST00000543789 HOXB4P17483 251 aaPredicted RBP20.81■□□□□ 0.92
CDKN3-207ENST00000543789 DNASE1P24855 282 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 SERPINB3P29508 390 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 PLIN5Q00G26 463 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 E2F2Q14209 437 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 KHDRBS2Q5VWX1 349 aaKnown RBP20.81■□□□□ 0.92
CDKN3-207ENST00000543789 OR4C11Q6IEV9 310 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 DGAT2L6Q6ZPD8 337 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 SEM1Q6ZVN7 128 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 LRRC70Q7Z2Q7 622 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 LAS2Q8IYD9 372 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 ZBED8Q8IZ13 594 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 LIX1Q8N485 282 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 FAM13CQ8NE31 585 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 LRRC46Q96FV0 321 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 FBXL20Q96IG2 436 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 SLC6A15Q9H2J7 730 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 OR51B5Q9H339 312 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 TXNDC16Q9P2K2 825 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 RNF112Q9ULX5 631 aa20.81■□□□□ 0.92
CDKN3-207ENST00000543789 IQANK1A0A1B0GTG1 560 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 LRRC3CA6NJW4 275 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 AHRRA9YTQ3 701 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 DVL2O14641 736 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 PROM1O43490 865 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 FBXO45P0C2W1 286 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 STMN1P16949 149 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 SERPINB1P30740 379 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 TLX1P31314 330 aaPredicted RBP20.8■□□□□ 0.92
CDKN3-207ENST00000543789 DEPDC1Q5TB30 811 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 CAPN12Q6ZSI9 719 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 SLC29A4Q7RTT9 530 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 GPR180Q86V85 440 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 OR7G3Q8NG95 312 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 OR10G3Q8NGC4 313 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 FAM222BQ8WU58 562 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 CDKL2Q92772 493 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 SORBS1Q9BX66 1292 aaKnown RBP20.8■□□□□ 0.92
CDKN3-207ENST00000543789 PLEKHA6Q9Y2H5 1048 aa20.8■□□□□ 0.92
CDKN3-207ENST00000543789 CHCHD2Q9Y6H1 151 aaPredicted RBP20.8■□□□□ 0.92
CDKN3-207ENST00000543789 A6NNC1 897 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 CXorf49A8MYA2 514 aaPredicted RBP20.79■□□□□ 0.92
CDKN3-207ENST00000543789 ZSCAN12O43309 604 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 ALOX15P16050 662 aaPredicted RBP20.79■□□□□ 0.92
CDKN3-207ENST00000543789 BMP5P22003 454 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 TRPC1P48995 793 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 CBLBQ13191 982 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 FLYWCH1Q4VC44 716 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 CDC20BQ86Y33 519 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 RELL2Q8NC24 303 aaPredicted RBP20.79■□□□□ 0.92
CDKN3-207ENST00000543789 DOK4Q8TEW6 326 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 PYROXD1Q8WU10 500 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 EXT2Q93063 718 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 RNASE6Q93091 150 aaKnown RBP20.79■□□□□ 0.92
CDKN3-207ENST00000543789 RGMAQ96B86 450 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 UBXN10Q96LJ8 280 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 GAL3ST4Q96RP7 486 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 CPNE1Q99829 537 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 DOHHQ9BU89 302 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 ADGRE2Q9UHX3 823 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 PHF11Q9UIL8 331 aa20.79■□□□□ 0.92
CDKN3-207ENST00000543789 EPPINO95925 133 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 C1QAP02745 245 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ASCL1P50553 236 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 DGKQP52824 942 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 HERVK_113P63132 956 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ERVK-8P63133 956 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 PCDH1Q08174 1060 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 FOXD4Q12950 439 aaPredicted RBP20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ZNF267Q14586 743 aaPredicted RBP20.78■□□□□ 0.92
CDKN3-207ENST00000543789 C18orf63Q68DL7 685 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ST13P4Q8IZP2 240 aaPredicted RBP20.78■□□□□ 0.92
CDKN3-207ENST00000543789 TNIP2Q8NFZ5 429 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 STAG3L4Q8TBR4 150 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 GPR22Q99680 433 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 SH3GL2Q99962 352 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 CENPKQ9BS16 269 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ERVK-6Q9BXR3 956 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 WWTR1Q9GZV5 400 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ZNF629Q9UEG4 869 aaPredicted RBP20.78■□□□□ 0.92
CDKN3-207ENST00000543789 CNOT11Q9UKZ1 510 aaKnown RBP20.78■□□□□ 0.92
CDKN3-207ENST00000543789 ERVK-19Q9WJR5 959 aa20.78■□□□□ 0.92
CDKN3-207ENST00000543789 C15orf38-AP3S2A0A0A6YYH1 394 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 EFCAB8A8MWE9 144 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 OR10H2O60403 315 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 GDF1P27539 372 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 SSTR1P30872 391 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 CEACAM8P31997 349 aaPredicted RBP20.77■□□□□ 0.92
CDKN3-207ENST00000543789 RAP1GDS1P52306 607 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 RAB10P61026 200 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 TNFRSF17Q02223 184 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 DUSP8Q13202 625 aa20.77■□□□□ 0.92
CDKN3-207ENST00000543789 ZKSCAN8Q15776 578 aaPredicted RBP20.77■□□□□ 0.92
CDKN3-207ENST00000543789 NTRK2Q16620 822 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms