RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 SOCS6O14544 535 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 COX7A2P14406 83 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 PRPS1L1P21108 318 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 PIK3R1P27986 724 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 HPCAL1P37235 193 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 ZFP36L2P47974 494 aaKnown RBP19.48■□□□□ 0.71
OTUB1-211ENST00000543004 IGLV3-21P80748 117 aaPredicted RBP19.48■□□□□ 0.71
OTUB1-211ENST00000543004 PDCD4Q53EL6 469 aaKnown RBP19.48■□□□□ 0.71
OTUB1-211ENST00000543004 KIRREL2Q6UWL6 708 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 METTL21AQ8WXB1 218 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 PPCDCQ96CD2 204 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 SLAMF7Q9NQ25 335 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 SLC35C2Q9NQQ7 365 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 PNO1Q9NRX1 252 aaKnown RBP19.48■□□□□ 0.71
OTUB1-211ENST00000543004 EHD3Q9NZN3 535 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 ATP6V1HQ9UI12 483 aa19.48■□□□□ 0.71
OTUB1-211ENST00000543004 SRRM3A6NNA2 597 aaPredicted RBP19.47■□□□□ 0.71
OTUB1-211ENST00000543004 FAM107AO95990 144 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 UBAP2LQ14157 1087 aaKnown RBP19.47■□□□□ 0.71
OTUB1-211ENST00000543004 PGS1Q32NB8 556 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 SFT2D3Q587I9 215 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 CCDC116Q8IYX3 515 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 MIER2Q8N344 545 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 WDR77Q9BQA1 342 aaPredicted RBP19.47■□□□□ 0.71
OTUB1-211ENST00000543004 EFHD1Q9BUP0 239 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 FAM117AQ9C073 453 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 NUP214P35658 2090 aaPredicted RBP19.47■□□□□ 0.71
OTUB1-211ENST00000543004 MGAQ8IWI9 3026 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 CDC14CA4D256 554 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 RRP8O43159 456 aaKnown RBP19.47■□□□□ 0.71
OTUB1-211ENST00000543004 SLC22A3O75751 556 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 IFNA16P05015 189 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 CPMP14384 443 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 DGKQP52824 942 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 OR4D2P58180 307 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 C21orf58P58505 322 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 PHC1P78364 1004 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 TLE3Q04726 772 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 SPANXN4Q5MJ08 99 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 OR11G2Q8NGC1 345 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 NMUR2Q9GZQ4 415 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 CLMPQ9H6B4 373 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 TAS2R7Q9NYW3 318 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 PSME2Q9UL46 239 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 TRIM33Q9UPN9 1127 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 ZNF780BQ9Y6R6 833 aa19.47■□□□□ 0.71
OTUB1-211ENST00000543004 DSPP15924 2871 aaKnown RBP19.46■□□□□ 0.71
OTUB1-211ENST00000543004 SEC24DO94855 1032 aaPredicted RBP19.46■□□□□ 0.71
OTUB1-211ENST00000543004 STX1BP61266 288 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 ATP1A4Q13733 1029 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 LTB4RQ15722 352 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 FAM174BQ3ZCQ3 159 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 CPTPQ5TA50 214 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 METTL21CQ5VZV1 264 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 CPEB2Q7Z5Q1 589 aaKnown RBP19.46■□□□□ 0.71
OTUB1-211ENST00000543004 MTERF4Q7Z6M4 381 aaKnown RBP19.46■□□□□ 0.71
OTUB1-211ENST00000543004 MRGPREQ86SM8 312 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 FUNDC1Q8IVP5 155 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 ADCY4Q8NFM4 1077 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 SUN3Q8TAQ9 357 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 MTERF3Q96E29 417 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 CPNE5Q9HCH3 593 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 SAR1AQ9NR31 198 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 CCDC167Q9P0B6 97 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 ACACBO00763 2458 aa19.46■□□□□ 0.71
OTUB1-211ENST00000543004 LOC102723996A0A087X1L8 192 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 HRKO00198 91 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 TBX19O60806 448 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 COX6A1P12074 109 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 PORP16435 677 aaPredicted RBP19.45■□□□□ 0.7
OTUB1-211ENST00000543004 STT3AP46977 705 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 SQLEQ14534 574 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 PCOLCEQ15113 449 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 OR4F3Q6IEY1 312 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 R3HCC1LQ7Z5L2 792 aaKnown RBP19.45■□□□□ 0.7
OTUB1-211ENST00000543004 PTPMT1Q8WUK0 201 aaPredicted RBP19.45■□□□□ 0.7
OTUB1-211ENST00000543004 COQ8BQ96D53 544 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 DGAT2Q96PD7 388 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 P4HTMQ9NXG6 502 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 ZIM2Q9NZV7 527 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 ENTPD4Q9Y227 616 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 MED13Q9UHV7 2174 aa19.45■□□□□ 0.7
OTUB1-211ENST00000543004 IGHV1-45A0A0A0MS14 117 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 MYO1GB0I1T2 1018 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 IGHEP01854 428 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 SLC35E2P0CK97 266 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 CSNK2A2P19784 350 aaPredicted RBP19.44■□□□□ 0.7
OTUB1-211ENST00000543004 SOX18P35713 384 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 WNT3P56703 355 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 SERTAD2Q14140 314 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 CEBPEQ15744 281 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 CCDC81Q6ZN84 652 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 ZNF551Q7Z340 670 aaPredicted RBP19.44■□□□□ 0.7
OTUB1-211ENST00000543004 MTDHQ86UE4 582 aaKnown RBP19.44■□□□□ 0.7
OTUB1-211ENST00000543004 ST13P4Q8IZP2 240 aaPredicted RBP19.44■□□□□ 0.7
OTUB1-211ENST00000543004 FAM9CQ8IZT9 166 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 TESCQ96BS2 214 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 RBM18Q96H35 190 aaKnown RBP19.44■□□□□ 0.7
OTUB1-211ENST00000543004 BBS4Q96RK4 519 aa19.44■□□□□ 0.7
OTUB1-211ENST00000543004 DUSP26Q9BV47 211 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms