RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SPANXN2Q5MJ10 180 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 CBWD5Q5RIA9 395 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 SYT6Q5T7P8 510 aaPredicted RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 MANEALQ5VSG8 457 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 LRRC38Q5VT99 294 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 GPR139Q6DWJ6 353 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 SLC27A4Q6P1M0 643 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 PLBD1Q6P4A8 553 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 MZT2AQ6P582 158 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TEX261Q6UWH6 196 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 RAB11FIP2Q7L804 512 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ZNF720Q7Z2F6 126 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 SLC26A11Q86WA9 606 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 PLD3Q8IV08 490 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ADGRF4Q8IZF3 695 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 RDH10Q8IZV5 341 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 CYP4Z2PQ8N1L4 340 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 KRT78Q8N1N4 520 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 FSTL5Q8N475 847 aaPredicted RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 OR4M1Q8NGD0 313 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 OR2T34Q8NGX1 318 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 OR2T3Q8NH03 318 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 NDNFQ8TB73 568 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ASZ1Q8WWH4 475 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 POP5Q969H6 163 aaKnown RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 SLC25A36Q96CQ1 311 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 YIPF6Q96EC8 236 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 DYNLL2Q96FJ2 89 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 PGAP3Q96FM1 320 aaPredicted RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TMEM41AQ96HV5 264 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 KLHL15Q96M94 604 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ZNF285Q96NJ3 590 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 HSD17B14Q9BPX1 270 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TTYH2Q9BSA4 534 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 CCM2Q9BSQ5 444 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TBCDQ9BTW9 1192 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TTLL2Q9BWV7 592 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 GSDMCQ9BYG8 508 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 SLC22A4Q9H015 551 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ZNF700Q9H0M5 742 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 FAM49AQ9H0Q0 323 aaPredicted RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ING2Q9H160 280 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ALX4Q9H161 411 aaPredicted RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TFB2MQ9H5Q4 396 aaKnown RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 KAT8Q9H7Z6 458 aaKnown RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 MRPS30Q9NP92 439 aaKnown RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 PLSCR3Q9NRY6 295 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 AGPAT4Q9NRZ5 378 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TBC1D22BQ9NU19 505 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 FAM49BQ9NUQ9 324 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 IMP3Q9NV31 184 aaKnown RBP5.56□□□□□ -1.52
XRCC4-206ENST00000542685 DNAJC11Q9NVH1 559 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 DPP3Q9NY33 737 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TAS2R14Q9NYV8 317 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 TMEM181Q9P2C4 612 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 DNAJB9Q9UBS3 223 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 DUX4Q9UBX2 424 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 UBQLN2Q9UHD9 624 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 ZNF639Q9UID6 485 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 PCDHGB6Q9Y5F9 930 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 LYVE1Q9Y5Y7 322 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 U3KQ87 197 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 LTBP4Q8N2S1 1624 aa5.56□□□□□ -1.52
XRCC4-206ENST00000542685 FRMPD2Q68DX3 1309 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CNTNAP2Q9UHC6 1331 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 A0A075B6Q4 140 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 hCG_1807616A0A1W2PRN6 198 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 OR6C70A6NIJ9 312 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 STMND1H3BQB6 276 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 DLGAP1O14490 977 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 MEIS2O14770 477 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 OGTO15294 1046 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ADAM12O43184 909 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 SEC14L5O43304 696 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CHMP2AO43633 222 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RAD1O60671 282 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 GLRA3O75311 464 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RBBP9O75884 186 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RB1P06400 928 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 APOA4P06727 396 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ADORA3P0DMS8 318 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 TMEM225BP0DP42 221 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CTSAP10619 480 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 PRG2P13727 222 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 GNSP15586 552 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 SPI1P17947 270 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 PTBP1P26599 531 aaKnown RBP eCLIP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 TACR3P29371 465 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 EPHX2P34913 555 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CD79BP40259 229 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 GRIA1P42261 906 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RPS9P46781 194 aaKnown RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 QARSP47897 775 aaKnown RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 KCNJ1P48048 391 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CLCNKAP51800 687 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CDH4P55283 916 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 PRMT2P55345 433 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 SNAP25P60880 206 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CXCR4P61073 352 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ABCE1P61221 599 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms