RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 AP2B1P63010 937 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 KCNC4Q03721 635 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 DUSP2Q05923 314 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 MRPL49Q13405 166 aaKnown RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 ARL13AQ5H913 290 aaPredicted RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 Q6ZSR9 355 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 TMEM132CQ8N3T6 1108 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 SLC5A8Q8N695 610 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 GBP7Q8N8V2 638 aaPredicted RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 MORN4Q8NDC4 146 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 MDS2Q8NDY4 140 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 SIMC1Q8NDZ2 872 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 OR2T11Q8NH01 316 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 GRHL3Q8TE85 626 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 VMP1Q96GC9 406 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 RBM18Q96H35 190 aaKnown RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 OR8D2Q9GZM6 311 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 IQCGQ9H095 443 aaKnown RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.05□□□□□ -0.96
YBX3-212ENST00000542002 CENPHQ9H3R5 247 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 TEKT2Q9UIF3 430 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 PCDHA9Q9Y5H5 950 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 COPG1Q9Y678 874 aaKnown RBP9.05□□□□□ -0.96
YBX3-212ENST00000542002 SPTA1P02549 2419 aa9.05□□□□□ -0.96
YBX3-212ENST00000542002 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 WDR91A4D1P6 747 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 WWP2O00308 870 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 CTIFO43310 598 aaKnown RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 ITM2AO43736 263 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 NPHS1O60500 1241 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 PRAMEF2O60811 474 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ITGA10O75578 1167 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 OR2J2O76002 312 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ZFAND5O76080 213 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 FGF4P08620 206 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 SLC35E2P0CK97 266 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 UROSP10746 265 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ALOX15P16050 662 aaPredicted RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 S1PR1P21453 382 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 GNLYP22749 145 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 TRHRP34981 398 aaPredicted RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 XKP51811 444 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 TAS2R50P59544 299 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 NAA20P61599 178 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 RNF4P78317 190 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 PMP22Q01453 160 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 MGAT2Q10469 447 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 KIAA0040Q15053 153 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 OR1C1Q15619 314 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 KANK2Q63ZY3 851 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ZNF324BQ6AW86 544 aaPredicted RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 RPUSD3Q6P087 351 aaKnown RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 SLC48A1Q6P1K1 146 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 GALNT18Q6P9A2 607 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 LRIG3Q6UXM1 1119 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 PAGE2Q7Z2X7 111 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 MDGA2Q7Z553 956 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 C9orf40Q8IXQ3 194 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ST13P4Q8IZP2 240 aaPredicted RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 LGI4Q8N135 537 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 OR4K14Q8NGD5 310 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 OR14A16Q8NHC5 309 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.04□□□□□ -0.96
YBX3-212ENST00000542002 C16orf78Q8WTQ4 265 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 DAZLQ92904 295 aaKnown RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 PGM2Q96G03 612 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ZNF681Q96N22 645 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 DGAT2Q96PD7 388 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 UTP23Q9BRU9 249 aaKnown RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 EBPLQ9BY08 206 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 C20orf27Q9GZN8 174 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 CXorf21Q9HAI6 301 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 SIRT5Q9NXA8 310 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 MYOTQ9UBF9 498 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 ZDHHC2Q9UIJ5 367 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 MCM8Q9UJA3 840 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 EXO1Q9UQ84 846 aaKnown RBP9.04□□□□□ -0.96
YBX3-212ENST00000542002 DLGAP4Q9Y2H0 992 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 STK38LQ9Y2H1 464 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 TRAF6Q9Y4K3 522 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 DNAJC15Q9Y5T4 150 aa9.04□□□□□ -0.96
YBX3-212ENST00000542002 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
YBX3-212ENST00000542002 CCDC151A5D8V7 595 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 AZIN1O14977 448 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 PCDH7O60245 1069 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 LYPLA1O75608 230 aaPredicted RBP9.03□□□□□ -0.96
YBX3-212ENST00000542002 OR6B1O95007 311 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 UQCRHP07919 91 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 IL3P08700 152 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 LINC00032P0C843 101 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 DHRS4L1P0CG22 281 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 TACR1P25103 407 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 MST1P26927 711 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 SSTR4P31391 388 aa9.03□□□□□ -0.96
YBX3-212ENST00000542002 FEN1P39748 380 aaKnown RBP9.03□□□□□ -0.96
YBX3-212ENST00000542002 SERPINB4P48594 390 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms