RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RAB42Q8N4Z0 105 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 CLDN19Q8N6F1 224 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PNLDC1Q8NA58 520 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SIDT2Q8NBJ9 832 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 LSM14AQ8ND56 463 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 OR4E2Q8NGC2 313 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 MAGEC3Q8TD91 643 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 LCN9Q8WX39 176 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 TFGQ92734 400 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ART4Q93070 314 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 KIAA1143Q96AT1 154 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SARAFQ96BY9 339 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 FOPNLQ96NB1 174 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 FCRL4Q96PJ5 515 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 NAT9Q9BTE0 207 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 OR52A5Q9H2C5 316 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 CCDC68Q9H2F9 335 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 KLK15Q9H2R5 256 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SRMSQ9H3Y6 488 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 TFB2MQ9H5Q4 396 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PRORYQ9H606 182 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 KIR3DX1Q9H7L2 352 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 VIPAS39Q9H9C1 493 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SYTL2Q9HCH5 934 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 PDE7BQ9NP56 450 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 TREX1Q9NSU2 369 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 THAP1Q9NVV9 213 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 OCIAD1Q9NX40 245 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM9Q9P0T7 183 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SEMA5BQ9P283 1151 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SLC2A6Q9UGQ3 507 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ASIC3Q9UHC3 531 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 SLC24A2Q9UI40 661 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 GNPTGQ9UJJ9 305 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ASF1AQ9Y294 204 aa5.15□□□□□ -1.59
CPSF7-220ENST00000541963 MN1Q10571 1320 aaPredicted RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF106Q9H2Y7 1883 aaKnown RBP5.15□□□□□ -1.59
CPSF7-220ENST00000541963 URB1O60287 2271 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 NCOR2Q9Y618 2525 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 FAM237BA0A1B0GVD1 139 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 SLC5A10A0PJK1 596 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 GSAPA4D1B5 854 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OR6C74A6NCV1 312 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 TLCD2A6NGC4 264 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OR51F1A6NGY5 319 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 C2orf74A8MZ97 194 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 MGST3O14880 152 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 DSCR3O14972 297 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OR1I1O60431 355 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 VAPBO95292 243 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 ZBTB11O95625 1053 aaPredicted RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 TTC4O95801 387 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 CSF1P09603 554 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 PRSS56P0CW18 603 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 CYP4B1P13584 511 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 NELFEP18615 380 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 KRT4P19013 534 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 POLR2CP19387 275 aaPredicted RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OGNP20774 298 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 CDH3P22223 829 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 RPS3P23396 243 aaKnown RBP eCLIP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 NMBRP28336 390 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 TACR3P29371 465 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 SHMT2P34897 504 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 ETV5P41161 510 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 LEPRP48357 1165 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 GFERP55789 205 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 CRADDP78560 199 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 HSPA14Q0VDF9 509 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 DHX34Q14147 1143 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 KPNB1Q14974 876 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 KIAA0930Q6ICG6 404 aaPredicted RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 NEPROQ6NW34 567 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 TTC27Q6P3X3 843 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 Q6ZPA2 131 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 FAM92BQ6ZTR7 304 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF534Q76KX8 674 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OTOAQ7RTW8 1153 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 AMIGO1Q86WK6 493 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 ZFAND4Q86XD8 727 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 CEP112Q8N8E3 955 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 NAT8LQ8N9F0 302 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 PCYOX1LQ8NBM8 494 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 BBOF1Q8ND07 529 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 GPR150Q8NGU9 434 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OR8K5Q8NH50 307 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 ST8SIA4Q92187 359 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 HDAC2Q92769 488 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 SLCO2A1Q92959 643 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 CAPZA3Q96KX2 299 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 RMDN2Q96LZ7 410 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF778Q96MU6 729 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 OR6C1Q96RD1 312 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 FANCEQ9HB96 536 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 INTS10Q9NVR2 710 aaKnown RBP5.14□□□□□ -1.59
CPSF7-220ENST00000541963 PCYOX1Q9UHG3 505 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 RARRES3Q9UL19 164 aa5.14□□□□□ -1.59
CPSF7-220ENST00000541963 RCE1Q9Y256 329 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms