RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SAMD4A	Q9UPU9	718 aa	Known RBP	5.41	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TRBV5-3	A0A0A0MS03	114 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783		A0A0G2JMP0	313 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PNMA8C	A0A1B0GUJ8	204 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783		A0A1W2PPC4	97 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783		A0A1W2PQ09	198 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CLCA1	A8K7I4	914 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783		K7EQS6	105 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TLR4	O00206	839 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MANBA	O00462	879 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	AKR7A2	O43488	359 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CDK1	P06493	297 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ACPP	P15309	386 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NAT1	P18440	290 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CBL	P22681	906 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	IFNA8	P32881	189 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	HNF1B	P35680	557 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SOX6	P35712	828 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	HMGCL	P35914	325 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SPINT3	P49223	89 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ADPRH	P54922	357 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SEMG2	Q02383	582 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CHRNE	Q04844	493 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GPR50	Q13585	617 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SIGIRR	Q6IA17	410 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TMEM220	Q6QAJ8	160 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LIPI	Q6XZB0	460 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PRR23C	Q6ZRP0	262 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF605	Q86T29	641 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CCDC190	Q86UF4	302 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LAX1	Q8IWV1	398 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CLECL1	Q8IZS7	167 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	WFDC5	Q8TCV5	224 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MYDGF	Q969H8	173 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	COQ8B	Q96D53	544 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DTD2	Q96FN9	168 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SIGLEC11	Q96RL6	698 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	COQ7	Q99807	217 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	C19orf43	Q9BQ61	176 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ANKH	Q9HCJ1	492 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MS4A12	Q9NXJ0	267 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MKLN1	Q9UL63	735 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SPACA6	W5XKT8	324 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NYNRIN	Q9P2P1	1898 aa	Known RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	EFCAB10	A6NFE3	127 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	C12orf71	A8MTZ7	269 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	EVPLL	A8MZ36	301 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CLIC1	O00299	241 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CAPN5	O15484	640 aa	Predicted RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GPX5	O75715	221 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CLDN7	O95471	211 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SP9	P0CG40	484 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ENDOU	P21128	410 aa	Known RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RPS19	P39019	145 aa	Known RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SOX3	P41225	446 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MAGEA2	P43356	314 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KIAA1024L	P59773	190 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	C10orf62	Q5T681	223 aa	Predicted RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ANGPTL8	Q6UXH0	198 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MACC1	Q6ZN28	852 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783		Q6ZSR6	202 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ABI3BP	Q7Z7G0	1075 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NOXA1	Q86UR1	476 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SERPINA9	Q86WD7	417 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OR5H6	Q8NGV6	325 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SNAPC3	Q92966	411 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GTPBP3	Q969Y2	492 aa	Known RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PANX1	Q96RD7	426 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ACPT	Q9BZG2	426 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OR2AG1	Q9H205	316 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ASF1A	Q9Y294	204 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	HSPE1-MOB4	S4R3N1	261 aa		5.4	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PIPSL	A2A3N6	862 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PLRG1	O43660	514 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TSC22D2	O75157	780 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ERN1	O75460	977 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLITRK5	O94991	958 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KCNK5	O95279	499 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PDYN	P01213	254 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRL	P01236	227 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF10	P21506	573 aa	Predicted RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TEAD1	P28347	426 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLCN7	P51798	805 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ABHD18	Q0P651	414 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KRR1	Q13601	381 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TBCE	Q15813	527 aa	Predicted RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	VMAC	Q2NL98	169 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF683	Q8IZ20	524 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	B3GNT7	Q8NFL0	401 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR9Q2	Q8NGE9	314 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SELENOM	Q8WWX9	145 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UBE2E3	Q969T4	207 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RAD51AP1	Q96B01	352 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TADA1	Q96BN2	335 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	APIP	Q96GX9	242 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LRRC3B	Q96PB8	259 aa		5.4	□□□□□ -1.55

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