RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 OR7G3Q8NG95 312 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 NEIL3Q8TAT5 605 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 STAG3L4Q8TBR4 150 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 POM121Q96HA1 1249 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 CENPKQ9BS16 269 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 TRIM31Q9BZY9 425 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 RPF2Q9H7B2 306 aaKnown RBP11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 NUDT4Q9NZJ9 180 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 SPRR3Q9UBC9 169 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 TSC22D4Q9Y3Q8 395 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 DNAJC13O75165 2243 aa11.06□□□□□ -0.64
CBX3P4-202ENST00000540428 IQANK1A0A1B0GTG1 560 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 ANKRD33BA6NCL7 494 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 LRRC3CA6NJW4 275 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 FAM159BA6NKW6 160 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 OR6C76A6NM76 312 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 CXorf49A8MYA2 514 aaPredicted RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 AHRRA9YTQ3 701 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 K7EPI3 171 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 SYT5O00445 386 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 PIAS1O75925 651 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 RFPL3SP0C7P2 107 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 PCNAP12004 261 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 ALOX15P16050 662 aaPredicted RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 SSTR1P30872 391 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 GALNSP34059 522 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 PIK3CBP42338 1070 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 KIR2DL3P43628 341 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 RPL21P46778 160 aaKnown RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 TNFRSF17Q02223 184 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 GRHL2Q6ISB3 625 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 SLC29A4Q7RTT9 530 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 WDR53Q7Z5U6 358 aaPredicted RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 GPR180Q86V85 440 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 TGIF2LYQ8IUE0 185 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 OR4N5Q8IXE1 308 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 ZZZ3Q8IYH5 903 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 ULK2Q8IYT8 1036 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 LIX1Q8N485 282 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 UBTD2Q8WUN7 234 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 NRGNQ92686 78 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 RGMAQ96B86 450 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 LRRC46Q96FV0 321 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 CNPPD1Q9BV87 410 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 POLDIP3Q9BY77 421 aaKnown RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 OR51B5Q9H339 312 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 PROK2Q9HC23 129 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 PRM3Q9NNZ6 103 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 RASSF1Q9NS23 344 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 CCM2LQ9NUG4 571 aaPredicted RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 ALKBH4Q9NXW9 302 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 OPTCQ9UBM4 332 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 RNF14Q9UBS8 474 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 ST6GALNAC2Q9UJ37 374 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 FOXD3Q9UJU5 478 aaPredicted RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 CHCHD2Q9Y6H1 151 aaPredicted RBP11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 IKBKGQ9Y6K9 419 aa11.05□□□□□ -0.64
CBX3P4-202ENST00000540428 TCRBV9S1A1TA0A576 114 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 HRKO00198 91 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 DVL2O14641 736 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 KERAO60938 352 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 GSTA2P09210 222 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 SPRP35270 261 aaPredicted RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 TIMP3P35625 211 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 BUD31P41223 144 aaPredicted RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 PAFAH1B1P43034 410 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 ASCL1P50553 236 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 RAP1GDS1P52306 607 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 SLC37A1P57057 533 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 NTRK2Q16620 822 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 PRAMEF20Q5VT98 475 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 C18orf63Q68DL7 685 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 RNF111Q6ZNA4 994 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 DGAT2L6Q6ZPD8 337 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 CAPN12Q6ZSI9 719 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 SEM1Q6ZVN7 128 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 ISCA2Q86U28 154 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 FAM13CQ8NE31 585 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 OR10G3Q8NGC4 313 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 HUS1BQ8NHY5 278 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 FAM222BQ8WU58 562 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 EXT2Q93063 718 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 PPWD1Q96BP3 646 aaKnown RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 RMND5BQ96G75 393 aaPredicted RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 ATOH8Q96SQ7 321 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 CLEC4MQ9H2X3 399 aaPredicted RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 ALG9Q9H6U8 611 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 NMRAL1Q9HBL8 299 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 DMRT3Q9NQL9 472 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 ZNF358Q9NW07 568 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 TRMT1Q9NXH9 659 aaKnown RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 ZNF629Q9UEG4 869 aaPredicted RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 CNOT11Q9UKZ1 510 aaKnown RBP11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 SAR1BQ9Y6B6 198 aa11.04□□□□□ -0.64
CBX3P4-202ENST00000540428 CCDC189A1A4V9 331 aa11.03□□□□□ -0.64
CBX3P4-202ENST00000540428 CAPN14A8MX76 684 aa11.03□□□□□ -0.64
CBX3P4-202ENST00000540428 SUPT3HB4E1H0 165 aa11.03□□□□□ -0.64
CBX3P4-202ENST00000540428 SAP18O00422 153 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms