RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ZNF630Q2M218 657 aaPredicted RBP12.96□□□□□ -0.33
BNIP3-202ENST00000540159 DCST1Q5T197 706 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 CCBE1Q6UXH8 406 aaPredicted RBP12.96□□□□□ -0.33
BNIP3-202ENST00000540159 B3GLCTQ6Y288 498 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 AMZ2Q86W34 360 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 GATAD2AQ86YP4 633 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 DEPDC4Q8N2C3 294 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 POLR2J3Q9H1A7 115 aaKnown RBP12.96□□□□□ -0.33
BNIP3-202ENST00000540159 SERHL2Q9H4I8 314 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 KLHL31Q9H511 634 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 MYNNQ9NPC7 610 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 TIGARQ9NQ88 270 aa12.96□□□□□ -0.33
BNIP3-202ENST00000540159 ZCCHC3Q9NUD5 404 aaKnown RBP12.96□□□□□ -0.33
BNIP3-202ENST00000540159 MTCL1Q9Y4B5 1905 aaKnown RBP12.96□□□□□ -0.33
BNIP3-202ENST00000540159 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 KRT75O95678 551 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 CCT3P49368 545 aaKnown RBP12.96□□□□□ -0.34
BNIP3-202ENST00000540159 RAB8AP61006 207 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 SPANXN2Q5MJ10 180 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 C9orf64Q5T6V5 341 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 CAMKMTQ7Z624 323 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 LAS2Q8IYD9 372 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 LRRC56Q8IYG6 542 aaPredicted RBP12.96□□□□□ -0.34
BNIP3-202ENST00000540159 RAD51AP1Q96B01 352 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 ZG16BQ96DA0 208 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 MAGEB10Q96LZ2 347 aaPredicted RBP12.96□□□□□ -0.34
BNIP3-202ENST00000540159 C19orf43Q9BQ61 176 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 FZD3Q9NPG1 666 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 TBC1D14Q9P2M4 693 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 ALPK3Q96L96 1907 aa12.96□□□□□ -0.34
BNIP3-202ENST00000540159 HMGN4O00479 90 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 LINC00271P0C7V0 271 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 SSR2P43308 183 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 XKP51811 444 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 FADDQ13158 208 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 KHDRBS2Q5VWX1 349 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 IQCHQ86VS3 1027 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CCDC116Q8IYX3 515 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 SHISA5Q8N114 240 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CAPSLQ8WWF8 208 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 POLR2J2Q9GZM3 115 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 MMP27Q9H306 513 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 SAGE1Q9NXZ1 904 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 MALT1Q9UDY8 824 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 NTNG1Q9Y2I2 539 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CACNA1IQ9P0X4 2223 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 SERTM1A2A2V5 107 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 PI15O43692 258 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 RHCEP18577 417 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 ELAVL4P26378 380 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 GJA8P48165 433 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 UGT2B15P54855 530 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 PCBP3P57721 371 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 ATAD3BQ5T9A4 648 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CASP12Q6UXS9 341 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 LAX1Q8IWV1 398 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 C7orf57Q8NEG2 295 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 OR9Q1Q8NGQ5 310 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 OR8K5Q8NH50 307 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 GPR151Q8TDV0 419 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CXorf40AQ8TE69 158 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 COL26A1Q96A83 441 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 DMRTB1Q96MA1 342 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 FERD3LQ96RJ6 166 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 GPA33Q99795 319 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 ZCCHC2Q9C0B9 1178 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 MBNL1Q9NR56 388 aaKnown RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 FTSJ1Q9UET6 329 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 IRAK3Q9Y616 596 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 KCNE3Q9Y6H6 103 aa12.95□□□□□ -0.34
BNIP3-202ENST00000540159 ARID1BQ8NFD5 2236 aaPredicted RBP12.95□□□□□ -0.34
BNIP3-202ENST00000540159 CISD3P0C7P0 127 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ACADLP28330 430 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ALDH6A1Q02252 535 aaKnown RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PDE7AQ13946 482 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 CRB2Q5IJ48 1285 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 NLRP8Q86W28 1048 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 KRT78Q8N1N4 520 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 SYT14Q8NB59 555 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 OR8D1Q8WZ84 308 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 C16orf58Q96GQ5 468 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 C12orf66Q96MD2 445 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ASPNQ9BXN1 380 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF717Q9BY31 904 aaPredicted RBP12.94□□□□□ -0.34
BNIP3-202ENST00000540159 TMEM245Q9H330 911 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 EGLN3Q9H6Z9 239 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 SPATA7Q9P0W8 599 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 DEC1Q9P2X7 70 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 SERGEFQ9UGK8 458 aa12.94□□□□□ -0.34
BNIP3-202ENST00000540159 PCDHGB6Q9Y5F9 930 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms