RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 IDSP22304 550 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 CDH11P55287 796 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GINS1Q14691 196 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 DUSP6Q16828 381 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 NHSL2Q5HYW2 709 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 OLFML2AQ68BL7 652 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 LIPIQ6XZB0 460 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 HSDL2Q6YN16 418 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GOLM1Q8NBJ4 401 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 OR14C36Q8NHC7 312 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PROKR1Q8TCW9 393 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 RPL3LQ92901 407 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 APIPQ96GX9 242 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 MAPKAP1Q9BPZ7 522 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 C19orf43Q9BQ61 176 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 KXD1Q9BQD3 176 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 DOHHQ9BU89 302 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 TSSK6Q9BXA6 273 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ELL3Q9HB65 397 aaPredicted RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PHPT1Q9NRX4 125 aaPredicted RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GPRC5BQ9NZH0 403 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 RTCAO00442 366 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 TSPAN6O43657 245 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 HPRP00739 348 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ACP5P13686 325 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 AOAHP28039 575 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 C21orf33P30042 268 aaPredicted RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 RPL6Q02878 288 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 TMEM115Q12893 351 aaPredicted RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 SELPLGQ14242 412 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ELAVL3Q14576 367 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF234Q14588 700 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 HNRNPA1L2Q32P51 320 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 CCDC157Q569K6 752 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF311Q5JNZ3 666 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 FAM46CQ5VWP2 391 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 TANGO2Q6ICL3 276 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 DPPA4Q7L190 304 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 LINGO2Q7L985 606 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 SLC5A8Q8N695 610 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 SH3YL1Q96HL8 342 aaPredicted RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 SOHLH2Q9NX45 425 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PHF11Q9UIL8 331 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GDI1P31150 447 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 CLCNKAP51800 687 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 CLDN8P56748 225 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 B4GALNT1Q00973 533 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 HSF2Q03933 536 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 DOC2AQ14183 400 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 EIF4HQ15056 248 aaKnown RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 COQ5Q5HYK3 327 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 PLEKHS1Q5SXH7 462 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 C22orf42Q6IC83 251 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 CARM1Q86X55 608 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 PEX5LQ8IYB4 626 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 MFSD2AQ8NA29 543 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 TMEM145Q8NBT3 493 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 TFGQ92734 400 aaPredicted RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 NUS1Q96E22 293 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 C1QTNF3Q9BXJ4 246 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 GDE1Q9NZC3 331 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 TNFRSF10DQ9UBN6 386 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 PLXNA4Q9HCM2 1894 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 FAM170BA6NMN3 283 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 EMX1Q04741 257 aaPredicted RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF763Q0D2J5 394 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 RUNX3Q13761 415 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 SPHARQ15513 63 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 TSPYL5Q86VY4 417 aaPredicted RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 NUDT13Q86X67 352 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 ASCC1Q8N9N2 400 aaKnown RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 SRFBP1Q8NEF9 429 aaKnown RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 GPR151Q8TDV0 419 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 TMEM80Q96HE8 168 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 PBX4Q9BYU1 374 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 ZBTB20Q9HC78 741 aaPredicted RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 SARDHQ9UL12 918 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 CACNB4O00305 520 aaPredicted RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 OR7A17O14581 309 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 TAPBPO15533 448 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 AKAP8O43823 692 aaKnown RBP9.53□□□□□ -0.88
TRAF1-202ENST00000540010 CISD3P0C7P0 127 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 HTR1BP28222 390 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 SPCS2Q15005 226 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 UBE2UQ5VVX9 321 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 REEP3Q6NUK4 255 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 SLC30A6Q6NXT4 461 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 BORAQ6PGQ7 559 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 NUDT8Q8WV74 236 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 C17orf50Q8WW18 174 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 LCN9Q8WX39 176 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 MND1Q9BWT6 205 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 IL1RAPQ9NPH3 570 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 NECTIN3Q9NQS3 549 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 P2RX2Q9UBL9 471 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 CARD8Q9Y2G2 431 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 PCDHGB5Q9Y5G0 923 aa9.53□□□□□ -0.88
TRAF1-202ENST00000540010 A0A1W2PPK0 400 aa9.52□□□□□ -0.88
TRAF1-202ENST00000540010 H7BY64 318 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms