RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PRDM7Q9NQW5 492 aa16.97■□□□□ 0.31
GNE-204ENST00000539208 FTSJ1Q9UET6 329 aa16.97■□□□□ 0.31
GNE-204ENST00000539208 ASB4Q9Y574 426 aa16.97■□□□□ 0.31
GNE-204ENST00000539208 DSPPQ9NZW4 1301 aa16.97■□□□□ 0.31
GNE-204ENST00000539208 EPOPA6NHQ4 379 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 ZAR1LA6NP61 321 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 PDZK1P1A8MUH7 402 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 M0R3G1 203 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 MPZL2O60487 215 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SERPINB7O75635 380 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 ADAP00813 363 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 LCKP06239 509 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 FUT4P22083 530 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 HIST1H1TP22492 207 aaPredicted RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 TSFMP43897 325 aaKnown RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 GSSP48637 474 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 CDC42P60953 191 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 OCA2Q04671 838 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 DGCR6Q14129 220 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 PTGES3Q15185 160 aaKnown RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 TMEM196Q5HYL7 178 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SDE2Q6IQ49 451 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 TCTN3Q6NUS6 607 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 KLHL17Q6TDP4 642 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 UTP15Q8TED0 518 aaKnown RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 SLC38A4Q969I6 547 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SLC35G5Q96KT7 338 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 PRDM8Q9NQV8 689 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 IMPAD1Q9NX62 359 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 ACAD8Q9UKU7 415 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 GPC6Q9Y625 555 aaPredicted RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 A0A0G2JN53 185 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SH3D21A4FU49 640 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 ANHXE9PGG2 379 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 HAT1O14929 419 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 NTSP30990 170 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SLC19A1P41440 591 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 CRISP1P54107 249 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 HYAL1Q12794 435 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 DGUOKQ16854 277 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 FRMPD2BQ6IN97 320 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SLC44A2Q8IWA5 706 aaPredicted RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 SRFBP1Q8NEF9 429 aaKnown RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 OR2L5Q8NG80 312 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 SFXN5Q8TD22 340 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 GTPBP3Q969Y2 492 aaKnown RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 MRPL38Q96DV4 380 aaKnown RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 SH3YL1Q96HL8 342 aaPredicted RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 TREX2Q9BQ50 279 aaPredicted RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 RHCGQ9UBD6 479 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 MOSPD1Q9UJG1 213 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 PNMA8BQ9ULN7 279 aaPredicted RBP16.96■□□□□ 0.31
GNE-204ENST00000539208 TMCC3Q9ULS5 477 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 COLEC10Q9Y6Z7 277 aa16.96■□□□□ 0.31
GNE-204ENST00000539208 TBC1D3DA0A087WVF3 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3IA0A087WXS9 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3EA0A087X179 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3KA0A087X1G2 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3FA6NER0 549 aaPredicted RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3LB9A6J9 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SLC28A2O43868 658 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3HP0C7X1 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 OR12D1P0DN82 309 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 CD36P16671 472 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 ATP5A1P25705 553 aaKnown RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 PEBP1P30086 187 aaKnown RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 GPC1P35052 558 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SMIM11AP58511 58 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SLAMF1Q13291 335 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TMED1Q13445 227 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3GQ6DHY5 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3CQ6IPX1 549 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 C16orf87Q6PH81 154 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SLCO6A1Q86UG4 719 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBC1D3Q8IZP1 549 aaPredicted RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 NDNFQ8TB73 568 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 DYNC2LI1Q8TCX1 351 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 OR51I1Q9H343 314 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SEMA3GQ9NS98 782 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 TBCCD1Q9NVR7 557 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SCML1Q9UN30 329 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 DUSP12Q9UNI6 340 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 MGAT4BQ9UQ53 548 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 PRAMEF27A3QJZ7 478 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 FAAHO00519 579 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 ERI3O43414 337 aaKnown RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 POU2F1P14859 743 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 CD72P21854 359 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 CHMP24386 653 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 C21orf33P30042 268 aaPredicted RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 CMPK1P30085 196 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 CTSKP43235 329 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 SERPINB10P48595 397 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 ANXA11P50995 505 aaKnown RBP16.95■□□□□ 0.3
GNE-204ENST00000539208 NCBP2P52298 156 aaKnown RBP eCLIP16.95■□□□□ 0.3
GNE-204ENST00000539208 ZNF425Q6IV72 752 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 BHLHB9Q6PI77 547 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 KRT73Q86Y46 540 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 FBXL6Q8N531 539 aa16.95■□□□□ 0.3
GNE-204ENST00000539208 ACOT4Q8N9L9 421 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms