RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 RSPO3Q9BXY4 272 aaPredicted RBP8.77□□□□□ -1.01
DDB1-211ENST00000538280 SERHL2Q9H4I8 314 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 WDR26Q9H7D7 661 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 PHPT1Q9NRX4 125 aaPredicted RBP8.77□□□□□ -1.01
DDB1-211ENST00000538280 ZSCAN32Q9NX65 697 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 GALNT8Q9NY28 637 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 EHD3Q9NZN3 535 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 SERGEFQ9UGK8 458 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 NDOR1Q9UHB4 597 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 ENOPH1Q9UHY7 261 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 ACAD8Q9UKU7 415 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 SLC17A4Q9Y2C5 497 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 WDR37Q9Y2I8 494 aa8.77□□□□□ -1.01
DDB1-211ENST00000538280 MAP1BP46821 2468 aaKnown RBP8.77□□□□□ -1.01
DDB1-211ENST00000538280 SHISA7A6NL88 538 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 ZAR1LA6NP61 321 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 J3KTA2 159 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 M0R082 166 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 PCDH17O14917 1159 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 LCMT2O60294 686 aaKnown RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 PDE9AO76083 593 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CCNB2O95067 398 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 MFN2O95140 757 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 GADD45GO95257 159 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 OXSR1O95747 527 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 FADS2O95864 444 aaKnown RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 VIPP01282 170 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 FUCA1P04066 466 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 IFNW1P05000 195 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 APODP05090 189 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 LAMP2P13473 410 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 DRD2P14416 443 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 ZNF12P17014 697 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CD72P21854 359 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 GRK3P35626 688 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SLC19A1P41440 591 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 OR1E2P47887 323 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 KCNJ5P48544 419 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 ST13P50502 369 aaKnown RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 RAB28P51157 221 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CLCNKAP51800 687 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 LIMK1P53667 647 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CASP9P55211 416 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 LIM2P55344 173 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CYP4F2P78329 520 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 PRDX1Q06830 199 aaKnown RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 HYAL2Q12891 473 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 PUM1Q14671 1186 aaKnown RBP eCLIP8.76□□□□□ -1.014e-6■□□□□ 8.5
DDB1-211ENST00000538280 TMEM35AQ53FP2 167 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 ZNF776Q68DI1 518 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 TSSK4Q6SA08 328 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CEACAM20Q6UY09 585 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 TMEM64Q6YI46 380 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 Q6ZPB1 254 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 AHSA2Q719I0 299 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 C6orf120Q7Z4R8 191 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CCDC103Q8IW40 242 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 HDDC3Q8N4P3 179 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 RAB42Q8N4Z0 105 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 C2orf73Q8N5S3 287 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 SMYD1Q8NB12 490 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 TTLQ8NG68 377 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 PHF10Q8WUB8 498 aaKnown RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 GGHQ92820 318 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SLC38A4Q969I6 547 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SCARF2Q96GP6 870 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 TMEM19Q96HH6 336 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SH3YL1Q96HL8 342 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 TEFMQ96QE5 360 aaKnown RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 MAPKAP1Q9BPZ7 522 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 ACAT2Q9BWD1 397 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 TWSG1Q9GZX9 223 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 BTBD1Q9H0C5 482 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 ABCG4Q9H172 646 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SLC6A20Q9NP91 592 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SLC2A4RGQ9NR83 387 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 FBXO8Q9NRD0 319 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 TEX10Q9NXF1 929 aaPredicted RBP8.76□□□□□ -1.01
DDB1-211ENST00000538280 RAB23Q9ULC3 237 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 SIT1Q9Y3P8 196 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 CORINQ9Y5Q5 1042 aa8.76□□□□□ -1.01
DDB1-211ENST00000538280 FEZF1A0PJY2 475 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 CLCA1A8K7I4 914 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 H7BY64 318 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 HMGN4O00479 90 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 FFAR1O14842 300 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 PLRG1O43660 514 aaKnown RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 SULT1C4O75897 302 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 SLITRK5O94991 958 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 ZBTB11O95625 1053 aaPredicted RBP8.75□□□□□ -1.01
DDB1-211ENST00000538280 ADAP00813 363 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 LCKP06239 509 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 CEACAM5P06731 702 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 FUT4P22083 530 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 PSMB9P28065 219 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 IGFALSP35858 605 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 UGT2B10P36537 528 aa8.75□□□□□ -1.01
DDB1-211ENST00000538280 OPRL1P41146 370 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms