RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 TMC8Q8IU68 726 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 TRAM1L1Q8N609 369 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 ANGPTL6Q8NI99 470 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 ENKURQ8TC29 256 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 TTC9Q92623 222 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 CIDECQ96AQ7 238 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 TMEM159Q96B96 161 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 FOPNLQ96NB1 174 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 NELL2Q99435 816 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 PKP4Q99569 1192 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 POLDIP3Q9BY77 421 aaKnown RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 NLNQ9BYT8 704 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 TRIM39Q9HCM9 518 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 RANGRFQ9HD47 186 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 PLEKHB1Q9UF11 243 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 NUFIP1Q9UHK0 495 aaKnown RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 ICKQ9UPZ9 632 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 HS3ST2Q9Y278 367 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 DYRK1BQ9Y463 629 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 TRAV19A0A0A6YYK7 116 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 SLC5A10A0PJK1 596 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 C5orf58C9J3I9 102 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 FFAR1O14842 300 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 TFECO14948 347 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 NPC1O15118 1278 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PROM1O43490 865 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 TGM5O43548 720 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 TMCC2O75069 709 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 SH3BGRLO75368 114 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 POP4O95707 220 aaKnown RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 LRG1P02750 347 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 H1F0P07305 194 aaKnown RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 CPN2P22792 545 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 VIPR1P32241 457 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 LIM2P55344 173 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 POLR2LP62875 67 aaKnown RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PPP3R1P63098 170 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 SLBPQ14493 270 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PUM1Q14671 1186 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 CYP27C1Q4G0S4 372 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 SNAP47Q5SQN1 464 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 SAXO2Q658L1 398 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PPP2R2DQ66LE6 453 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 HIST2H2AA3Q6FI13 130 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 KIAA1211LQ6NV74 962 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 METAP1DQ6UB28 335 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 OTOP2Q7RTS6 562 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 FAM26EQ8N5C1 309 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 NATD1Q8N6N6 113 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 OR5AK3PQ8NH89 298 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 DIRAS2Q96HU8 199 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 KCTD7Q96MP8 289 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ZBP1Q9H171 429 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 FAM83DQ9H4H8 585 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ZDHHC6Q9H6R6 413 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ANKRA2Q9H9E1 313 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 RPRD1BQ9NQG5 326 aaKnown RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PLSCR3Q9NRY6 295 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 RHCGQ9UBD6 479 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ACAD8Q9UKU7 415 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PCM1Q15154 2024 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 A0A1W2PQL4 384 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 HEPACAM2A8MVW5 462 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 H3BN98 237 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ARHGEF9O43307 516 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 OR10H3O60404 316 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 TBX19O60806 448 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 MTX2O75431 263 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 RB1P06400 928 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 CLTBP09497 229 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 TSPAN19P0C672 248 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 MSL3P1P0C860 447 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 C1GALT1C1LP0DN25 315 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 SDC2P34741 201 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 MAP2K3P46734 347 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 DGKGP49619 791 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 DUSP6Q16828 381 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 LEXMQ3ZCV2 418 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PLK5Q496M5 336 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ZNF628Q5EBL2 1059 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 C3orf38Q5JPI3 329 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 PGBD2Q6P3X8 592 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 HS6ST3Q8IZP7 471 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 LINC00471Q8N535 108 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 OR52I1Q8NGK6 324 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 NEIL2Q969S2 332 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 NEURL3Q96EH8 262 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 ZFYVE19Q96K21 471 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 LMLNQ96KR4 655 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 FUZQ9BT04 418 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 POLR2J3Q9H1A7 115 aaKnown RBP11.55□□□□□ -0.56
CPSF7-218ENST00000537641 DIABLOQ9NR28 239 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 CD84Q9UIB8 345 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
CPSF7-218ENST00000537641 MTCL1Q9Y4B5 1905 aaKnown RBP11.54□□□□□ -0.56
CPSF7-218ENST00000537641 TMEM129A0AVI4 362 aa11.54□□□□□ -0.56
CPSF7-218ENST00000537641 PIPSLA2A3N6 862 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms