RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SNRNP27Q8WVK2 155 aaKnown RBP3.03□□□□□ -1.92
CCDC7-208ENST00000537047 CTRCQ99895 268 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 TTYH2Q9BSA4 534 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 CCM2Q9BSQ5 444 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 MINDY3Q9H8M7 445 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 LMAN1LQ9HAT1 526 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 IL1RL2Q9HB29 575 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 ABCC13Q9NSE7 274 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 EXOC6BQ9Y2D4 811 aa3.03□□□□□ -1.92
CCDC7-208ENST00000537047 A0A0B4J203 849 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 H7C0S8 307 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 TBCAO75347 108 aaKnown RBP3.02□□□□□ -1.93
CCDC7-208ENST00000537047 FOXH1O75593 365 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 DUSP14O95147 198 aaKnown RBP3.02□□□□□ -1.93
CCDC7-208ENST00000537047 RLN1P04808 185 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 FCGR3AP08637 254 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 KRT3P12035 628 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 GSTO1P78417 241 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 SCN1BQ07699 218 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 PSMD6Q15008 389 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 PET117Q6UWS5 81 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 SPATA19Q7Z5L4 167 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 CREBRFQ8IUR6 639 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 LAX1Q8IWV1 398 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 TMEM99Q8N816 258 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-208ENST00000537047 IMMP1LQ96LU5 166 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 ERGIC2Q96RQ1 377 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 KCNMB3Q9NPA1 279 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 CHCHD3Q9NX63 227 aaKnown RBP3.02□□□□□ -1.93
CCDC7-208ENST00000537047 MLXQ9UH92 298 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 KLK12Q9UKR0 248 aa3.02□□□□□ -1.93
CCDC7-208ENST00000537047 TRAV34A0A0B4J273 112 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 ILVBLA1L0T0 632 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 CCDC162PA2VCL2 907 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 EFCAB7A8K855 629 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 KBTBD13C9JR72 458 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 LRP3O75074 770 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 CSO75390 466 aaKnown RBP3.01□□□□□ -1.93
CCDC7-208ENST00000537047 IGLV1-47P01700 117 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 VDRP11473 427 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 HSD17B1P14061 328 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 GJB2P29033 226 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 GP5P40197 560 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 FOLH1Q04609 750 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 ANKRD55Q3KP44 614 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 ZNF776Q68DI1 518 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-208ENST00000537047 TGIF2LYQ8IUE0 185 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 KLHL7Q8IXQ5 586 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 RNF149Q8NC42 400 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 OR1K1Q8NGR3 316 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 OCC1Q8TAD7 63 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 UBLCP1Q8WVY7 318 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-208ENST00000537047 ERO1AQ96HE7 468 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 INTS14Q96SY0 518 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 SCRT1Q9BWW7 348 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 LSG1Q9H089 658 aaKnown RBP3.01□□□□□ -1.93
CCDC7-208ENST00000537047 VIPAS39Q9H9C1 493 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 FAM212BQ9NTI7 297 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-208ENST00000537047 POMT1Q9Y6A1 747 aa3.01□□□□□ -1.93
CCDC7-208ENST00000537047 C5orf52A6NGY3 159 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 YDJCA8MPS7 323 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 CLN5O75503 358 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 SBK2P0C263 348 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 LAMP1P11279 417 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 LINC00315P59091 139 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 RPL27P61353 136 aaKnown RBP3□□□□□ -1.93
CCDC7-208ENST00000537047 TFCP2Q12800 502 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 SLC10A1Q14973 349 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 LYPLAL1Q5VWZ2 237 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 ALKBH5Q6P6C2 394 aaKnown RBP3□□□□□ -1.93
CCDC7-208ENST00000537047 C2orf66Q6UXQ4 117 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 ZNF444Q8N0Y2 327 aaPredicted RBP3□□□□□ -1.93
CCDC7-208ENST00000537047 KIAA0895Q8NCT3 520 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 Q8NFD4 153 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 SEPT8Q92599 483 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 DNASE1L2Q92874 299 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 SNRNP40Q96DI7 357 aaKnown RBP3□□□□□ -1.93
CCDC7-208ENST00000537047 ERP27Q96DN0 273 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 PIWIL1Q96J94 861 aaKnown RBP3□□□□□ -1.93
CCDC7-208ENST00000537047 ZNF665Q9H7R5 613 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 PRODH2Q9UF12 536 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 TMED7Q9Y3B3 224 aa3□□□□□ -1.93
CCDC7-208ENST00000537047 B4DXG7 233 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 LETM1O95202 739 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-208ENST00000537047 TIA1P31483 386 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC7-208ENST00000537047 TRPC1P48995 793 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 EFNA3P52797 238 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 TSPY1Q01534 308 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 ODF2Q5BJF6 829 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 FAM219BQ5XKK7 198 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 CAVIN1Q6NZI2 390 aaKnown RBP2.99□□□□□ -1.93
CCDC7-208ENST00000537047 SHQ1Q6PI26 577 aaKnown RBP2.99□□□□□ -1.93
CCDC7-208ENST00000537047 TRAT1Q6PIZ9 186 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 MKXQ8IYA7 352 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 SETD7Q8WTS6 366 aaKnown RBP2.99□□□□□ -1.93
CCDC7-208ENST00000537047 CKAP2Q8WWK9 683 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 FAM162AQ96A26 154 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 FAM122AQ96E09 287 aa2.99□□□□□ -1.93
CCDC7-208ENST00000537047 SGF29Q96ES7 293 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms