RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 CTNNAL1Q9UBT7 734 aa16.08■□□□□ 0.16
LTBR-206ENST00000536876 TEX264Q9Y6I9 313 aa16.08■□□□□ 0.16
LTBR-206ENST00000536876 ARID1AO14497 2285 aa16.08■□□□□ 0.16
LTBR-206ENST00000536876 FBN1P35555 2871 aaKnown RBP16.08■□□□□ 0.16
LTBR-206ENST00000536876 CLCA1A8K7I4 914 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 HRGP04196 525 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 HEXAP06865 529 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 GGT5P36269 586 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 KEAP1Q14145 624 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 E2F2Q14209 437 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 RCN2Q14257 317 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 FRA10AC1Q70Z53 315 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 BBOF1Q8ND07 529 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 FAM13CQ8NE31 585 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 ZNF473Q8WTR7 871 aaKnown RBP16.07■□□□□ 0.16
LTBR-206ENST00000536876 PTCD3Q96EY7 689 aaKnown RBP16.07■□□□□ 0.16
LTBR-206ENST00000536876 FBXL20Q96IG2 436 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 TIMP4Q99727 224 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 MDFIQ99750 246 aa16.07■□□□□ 0.16
LTBR-206ENST00000536876 ZNF629Q9UEG4 869 aaPredicted RBP16.07■□□□□ 0.16
LTBR-206ENST00000536876 MTRF1LQ9UGC7 380 aaKnown RBP16.07■□□□□ 0.16
LTBR-206ENST00000536876 C15orf38-AP3S2A0A0A6YYH1 394 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 TUBAL3A6NHL2 446 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 KIAA1324LA8MWY0 1029 aaPredicted RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 AHRRA9YTQ3 701 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 SH3BGRLO75368 114 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 HIST1H1TP22492 207 aaPredicted RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 GDF1P27539 372 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 SOX18P35713 384 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 HSPA7P48741 367 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 FRG1Q14331 258 aaKnown RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 EBPQ15125 230 aaKnown RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 POU4F3Q15319 338 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 OR4D1Q15615 310 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 NTRK2Q16620 822 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 NSUN5P2Q63ZY6 315 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 CLEC9AQ6UXN8 241 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 RNF175Q8N4F7 328 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 SPATA6LQ8N4H0 392 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 SLC15A4Q8N697 577 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 ZNF441Q8N8Z8 693 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 NTNG2Q96CW9 530 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 JSRP1Q96MG2 331 aaPredicted RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 WWTR1Q9GZV5 400 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 WWOXQ9NZC7 414 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 FOXD3Q9UJU5 478 aaPredicted RBP16.06■□□□□ 0.16
LTBR-206ENST00000536876 EDARQ9UNE0 448 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 COL6A5A8TX70 2615 aa16.06■□□□□ 0.16
LTBR-206ENST00000536876 MBD3L4A6NDZ8 208 aaPredicted RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 MBD3L3A6NE82 208 aaPredicted RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 MBD3L5A6NJ08 208 aaPredicted RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 C1QAP02745 245 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 MSH2P43246 934 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 HNRNPH2P55795 449 aaKnown RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 HERVK_113P63132 956 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 ERVK-8P63133 956 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 SORDQ00796 357 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 PPP1R7Q15435 360 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 C18orf63Q68DL7 685 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 TMEM64Q6YI46 380 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 CIARTQ8N365 385 aaPredicted RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 LIX1Q8N485 282 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 MBD3L2Q8NHZ7 208 aaPredicted RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 GRK7Q8WTQ7 553 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 PBKQ96KB5 322 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 ZNF597Q96LX8 424 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 DGAT2Q96PD7 388 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 GAL3ST4Q96RP7 486 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 TBCDQ9BTW9 1192 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 DOHHQ9BU89 302 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 EFCAB11Q9BUY7 163 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 ERVK-6Q9BXR3 956 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 DERL2Q9GZP9 239 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 EPB41L4BQ9H329 900 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 CNIH4Q9P003 139 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 ASIC3Q9UHC3 531 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 ERVK-19Q9WJR5 959 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 SLC6A5Q9Y345 797 aa16.05■□□□□ 0.16
LTBR-206ENST00000536876 ANK3Q12955 4377 aaKnown RBP16.05■□□□□ 0.16
LTBR-206ENST00000536876 WASHC1A8K0Z3 465 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 SAP18O00422 153 aaKnown RBP16.04■□□□□ 0.16
LTBR-206ENST00000536876 TP73O15350 636 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 PIAS1O75925 651 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 HPNP05981 417 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 CPN2P22792 545 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
LTBR-206ENST00000536876 HPDP32754 393 aaPredicted RBP16.04■□□□□ 0.16
LTBR-206ENST00000536876 GMPRP36959 345 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 CDK9P50750 372 aaKnown RBP16.04■□□□□ 0.16
LTBR-206ENST00000536876 SLC37A1P57057 533 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 TNFRSF17Q02223 184 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 TGM3Q08188 693 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
LTBR-206ENST00000536876 PDK4Q16654 411 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 SPRED3Q2MJR0 410 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 VASNQ6EMK4 673 aa16.04■□□□□ 0.16
LTBR-206ENST00000536876 SNX31Q8N9S9 440 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms