RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CPLX4Q7Z7G2 160 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 NFE4Q86UQ8 179 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 TAC4Q86UU9 113 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 CCAR2Q8N163 923 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 SIX6OS1Q8N1H7 587 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 OR2A12Q8NGT7 310 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 DQX1Q8TE96 717 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 SEMA4DQ92854 862 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 EEF2KMTQ96G04 330 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 PRMT1Q99873 361 aaKnown RBP4.99□□□□□ -1.61
CLIP1-207ENST00000536634 BLZF1Q9H2G9 400 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 ITM2BQ9Y287 266 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 OR51B4Q9Y5P0 310 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 FADS3Q9Y5Q0 445 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 RNF215Q9Y6U7 377 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 ABCA2Q9BZC7 2435 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 POLEQ07864 2286 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 SVILO95425 2214 aa4.99□□□□□ -1.61
CLIP1-207ENST00000536634 CTAGE9A4FU28 777 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 IGLON5A6NGN9 336 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 FPGTO14772 594 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 HS3ST1O14792 307 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 ZNHIT1O43257 154 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 SNAP91O60641 907 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 ZNF821O75541 412 aaPredicted RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 SLC25A12O75746 678 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CALCAP01258 141 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CTAGE8P0CG41 777 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 ADRB3P13945 408 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 POLR2CP19387 275 aaPredicted RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 SLC8A3P57103 927 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 RPS21P63220 83 aaKnown RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 SULT2A1Q06520 285 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 BST2Q10589 180 aaKnown RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CDC20Q12834 499 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CDC16Q13042 620 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 DEFB109BQ30KR1 87 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 TMEM35AQ53FP2 167 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 KRTCAP3Q53RY4 240 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 PMF1Q6P1K2 205 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 PAPD4Q6PIY7 484 aaKnown RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 MAP7D3Q8IWC1 876 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CTAGE4Q8IX94 777 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 SCML4Q8N228 414 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 KIAA0895Q8NCT3 520 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 OR1J2Q8NGS2 313 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 OR52I2Q8NH67 350 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 THAP6Q8TBB0 222 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 C7orf26Q96N11 449 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CATSPER2Q96P56 530 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 PSMB7Q99436 277 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 FEM1AQ9BSK4 669 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 LRRC1Q9BTT6 524 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 RDH14Q9HBH5 336 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 MBNL1Q9NR56 388 aaKnown RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 IRAK4Q9NWZ3 460 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 CGNQ9P2M7 1197 aaKnown RBP4.98□□□□□ -1.61
CLIP1-207ENST00000536634 HS3ST2Q9Y278 367 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 PKDREJQ9NTG1 2253 aa4.98□□□□□ -1.61
CLIP1-207ENST00000536634 ANKRD36A6QL64 1941 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 CROCCQ5TZA2 2017 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 LOC101059948A0A1B0GTJ6 334 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 A0A1W2PP11 408 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 F5H5T6 163 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 O00370 1275 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 KCNN4O15554 427 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 RAD1O60671 282 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 SOCS5O75159 536 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 IGLV3-25P01717 112 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 NR3C1P04150 777 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 FAM106CPP0CH98 169 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 UGT1A1P22309 533 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 TIMP3P35625 211 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 VAMP7P51809 220 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-207ENST00000536634 STK4Q13043 487 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 PNLIPRP3Q17RR3 467 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 PRR30Q53SZ7 412 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-207ENST00000536634 ZNF805Q5CZA5 627 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 SIRPB2Q5JXA9 342 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 SYPL2Q5VXT5 272 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 NSUN5P2Q63ZY6 315 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 LCN10Q6JVE6 187 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 LINGO4Q6UY18 593 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 MACC1Q6ZN28 852 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 SDCCAG8Q86SQ7 713 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-207ENST00000536634 VPS36Q86VN1 386 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 FAM114A1Q8IWE2 563 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 TEX19Q8NA77 164 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 DENND6BQ8NEG7 585 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 APOBEC4Q8WW27 367 aaKnown RBP4.97□□□□□ -1.61
CLIP1-207ENST00000536634 IRGQQ8WZA9 623 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 TSACCQ96A04 125 aaPredicted RBP4.97□□□□□ -1.61
CLIP1-207ENST00000536634 TMEM159Q96B96 161 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 CENPTQ96BT3 561 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 DHX58Q96C10 678 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 SLC45A3Q96JT2 553 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 EGLN2Q96KS0 407 aa4.97□□□□□ -1.61
CLIP1-207ENST00000536634 SERPINB11Q96P15 392 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms