RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TXNDC12O95881 172 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 C4BPAP04003 597 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 SNRPCP09234 159 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 NQO2P16083 231 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CD53P19397 219 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PTPN6P29350 595 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PBLDP30039 288 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 SDC2P34741 201 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 TRHRP34981 398 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 FEN1P39748 380 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 PPT1P50897 306 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OAZ1P54368 228 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 FABP9Q0Z7S8 132 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 GPR176Q14439 515 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 RBM39Q14498 530 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 TMEM44Q2T9K0 475 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ALG11Q2TAA5 492 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LINC01559Q495D7 138 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ETFRF1Q6IPR1 90 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PTCRAQ6ISU1 281 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 ZNF852Q6ZMS4 543 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 C3P1Q6ZMU1 363 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 NAA40Q86UY6 237 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ANKRD46Q86W74 232 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PTRH1Q86Y79 214 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 SERPINA12Q8IW75 414 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 C7orf61Q8IZ16 206 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 EFHBQ8N7U6 833 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 B3GNT7Q8NFL0 401 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OR2T11Q8NH01 316 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OR1S1Q8NH92 325 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OR14A16Q8NHC5 309 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MAFAQ8NHW3 353 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 STK35Q8TDR2 534 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CLEC4CQ8WTT0 213 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 HSD17B8Q92506 261 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 TM9SF4Q92544 642 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 UCN3Q969E3 161 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PDXPQ96GD0 296 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PPP1R16AQ96I34 528 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 H2AFJQ9BTM1 129 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ENKD1Q9H0I2 346 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ANKHQ9HCJ1 492 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LATS2Q9NRM7 1088 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 KRT84Q9NSB2 600 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ABCC13Q9NSE7 274 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 UFSP2Q9NUQ7 469 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 C2orf42Q9NWW7 574 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MYEF2Q9P2K5 600 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 SEC14L3Q9UDX4 400 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PLEKHB1Q9UF11 243 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 IKZF3Q9UKT9 509 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 TLR6Q9Y2C9 796 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 DHRS7Q9Y394 339 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CDH10Q9Y6N8 788 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MIA3Q5JRA6 1907 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 C2orf78A6NCI8 922 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 ZNF197O14709 1029 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ADAMDEC1O15204 470 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 TCAPO15273 167 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OIP5O43482 229 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SSNA1O43805 119 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ORC5O43913 435 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MFSD11O43934 449 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 HCN1O60741 890 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SEC22BO75396 215 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CNMDO75829 334 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MICAL2O94851 1124 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CCNB2O95067 398 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 MT-CYBP00156 380 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 F9P00740 461 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 EDN1P05305 212 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 FGF2P09038 288 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 UCHL1P09936 223 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LTA4HP09960 611 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 GGT1P19440 569 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 EFNA1P20827 205 aaPredicted RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 PAICSP22234 425 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 MST1P26927 711 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 LAP3P28838 519 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ANXA11P50995 505 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 LIMK1P53667 647 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SRSF3P84103 164 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 GTF2BQ00403 316 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ATP6AP1LQ52LC2 224 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 OXLD1Q5BKU9 147 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 TCTE1Q5JU00 501 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 CPZQ66K79 652 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 ESRP1Q6NXG1 681 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 NHLRC1Q6VVB1 395 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 HACD2Q6Y1H2 254 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 RAB11FIP2Q7L804 512 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 TIPARPQ7Z3E1 657 aaKnown RBP3.55□□□□□ -1.84
MCF2-210ENST00000536274 KLBQ86Z14 1044 aa3.55□□□□□ -1.84
MCF2-210ENST00000536274 PHYKPLQ8IUZ5 450 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms