RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 NCCRP1Q6ZVX7 275 aaPredicted RBP12.14□□□□□ -0.47
RTN3-207ENST00000536011 NUDT13Q86X67 352 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 ZNF321PQ8N8H1 164 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 OR5M3Q8NGP4 307 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 ZNF721Q8TF20 911 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
RTN3-207ENST00000536011 SMC6Q96SB8 1091 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 PSD3Q9NYI0 1048 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 CPSF2Q9P2I0 782 aaKnown RBP12.14□□□□□ -0.47
RTN3-207ENST00000536011 BOKQ9UMX3 212 aaPredicted RBP12.14□□□□□ -0.47
RTN3-207ENST00000536011 IKBKGQ9Y6K9 419 aa12.14□□□□□ -0.47
RTN3-207ENST00000536011 PDZD2O15018 2839 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 ESYT3A0FGR9 886 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 G3V3Y1 287 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 FOXE1O00358 373 aaPredicted RBP12.13□□□□□ -0.47
RTN3-207ENST00000536011 PROM1O43490 865 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 KLK8O60259 260 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SUSD5O60279 629 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SEMA3DO95025 777 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 CLDN9O95484 217 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 GPR75O95800 540 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 IGHG3P01860 377 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 INHBAP08476 426 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 ACVR2AP27037 513 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 GALNSP34059 522 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 GMPRP36959 345 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 RPS13P62277 151 aaKnown RBP12.13□□□□□ -0.47
RTN3-207ENST00000536011 KCNJ2P63252 427 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 CDSNQ15517 529 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 CPSF6Q16630 551 aaKnown RBP eCLIP12.13□□□□□ -0.47
RTN3-207ENST00000536011 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SPRED3Q2MJR0 410 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 ZNF750Q32MQ0 723 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 C6orf163Q5TEZ5 329 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SLC22A10Q63ZE4 541 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 RNF111Q6ZNA4 994 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 L3MBTL4Q8NA19 623 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
RTN3-207ENST00000536011 RIT1Q92963 219 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 ATP6V1E2Q96A05 226 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SARAFQ96BY9 339 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SPACA9Q96E40 222 aaPredicted RBP12.13□□□□□ -0.47
RTN3-207ENST00000536011 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 CNPPD1Q9BV87 410 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 SORBS1Q9BX66 1292 aaKnown RBP12.13□□□□□ -0.47
RTN3-207ENST00000536011 ENKD1Q9H0I2 346 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 ACSS3Q9H6R3 686 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 DDX31Q9H8H2 851 aaKnown RBP12.13□□□□□ -0.47
RTN3-207ENST00000536011 KCNJ16Q9NPI9 418 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 CNIH4Q9P003 139 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 B4GALT7Q9UBV7 327 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 ATG4BQ9Y4P1 393 aa12.13□□□□□ -0.47
RTN3-207ENST00000536011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.13□□□□□ -0.476e-7■■■□□ 15.7
RTN3-207ENST00000536011 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 A0A0A6YYD5 115 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 A0A0G2JMM0 328 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 A0A1W2PPB8 328 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 A0A1W2PRS3 328 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 KIR3DP1A8MWS1 328 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 CAPN14A8MX76 684 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 AQP7O14520 342 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 HCN1O60741 890 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 WDR1O75083 606 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 SMIM24O75264 130 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
RTN3-207ENST00000536011 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
RTN3-207ENST00000536011 RBP1P09455 135 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 FAM58BPP0C7Q3 252 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 CCL3P10147 92 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 SERPINB3P29508 390 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 MAGEA5P43359 124 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 KIR3DL1P43629 444 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 MAN2A2P49641 1150 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 HNRNPH2P55795 449 aaKnown RBP12.12□□□□□ -0.47
RTN3-207ENST00000536011 HERVK_113P63132 956 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ERVK-8P63133 956 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 SLC7A5Q01650 507 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 TRADDQ15628 312 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 C18orf63Q68DL7 685 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 OR52E8Q6IFG1 317 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 TRILQ7L0X0 811 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 PAGE2Q7Z2X7 111 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 GOLGA7Q7Z5G4 137 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 C9orf40Q8IXQ3 194 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ZNF295-AS1Q8N0V1 137 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 TAGAPQ8N103 731 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 TMEM251Q8N6I4 163 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 ACBD4Q8NC06 268 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 FAM13CQ8NE31 585 aa12.12□□□□□ -0.47
RTN3-207ENST00000536011 LILRB4Q8NHJ6 448 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms