RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF354AO60765 605 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TRAPPC6AO75865 159 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RAF1P04049 648 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CCDC166P0CW27 439 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FOSL1P15407 271 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ENDOUP21128 410 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MASP1P48740 699 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RPP38P78345 283 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PHEXP78562 749 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DR1Q01658 176 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 POU4F1Q01851 419 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PDIA2Q13087 525 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TOMM20Q15388 145 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CDKL4Q5MAI5 379 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TBCELQ5QJ74 424 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MED27Q6P2C8 311 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PAMR1Q6UXH9 720 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF793Q6ZN11 406 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CAPN12Q6ZSI9 719 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LRRC70Q7Z2Q7 622 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 KIF18BQ86Y91 864 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LACC1Q8IV20 430 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR4N5Q8IXE1 308 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PM20D2Q8IYS1 436 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SPATA6LQ8N4H0 392 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 BBOF1Q8ND07 529 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR10G3Q8NGC4 313 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DIO2Q92813 273 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CMTM7Q96FZ5 175 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FBXL20Q96IG2 436 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RPF2Q9H7B2 306 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PLAC1Q9HBJ0 212 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ACKR4Q9NPB9 350 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF490Q9ULM2 529 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 AKAP6Q13023 2319 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ARHGAP21Q5T5U3 1957 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 AHRRA9YTQ3 701 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EEF1E1-BLOC1S5C9J1V9 151 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TAPBPO15533 448 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EEF1E1O43324 174 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LRATO95237 230 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TBX6O95947 436 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TGFB1P01137 390 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RFPL3SP0C7P2 107 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ALOX15P16050 662 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 STMN1P16949 149 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 GCKP35557 465 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 GGT5P36269 586 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TMED10P49755 219 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 HERVK_113P63132 956 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ERVK-8P63133 956 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TNFRSF17Q02223 184 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DUSP8Q13202 625 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SLAMF1Q13291 335 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DDX39BQ13838 428 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF791Q3KP31 576 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 C6orf163Q5TEZ5 329 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 HLA-DQA1Q5Y7H0 255 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TAOK1Q7L7X3 1001 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MYLK4Q86YV6 388 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 KLHL7Q8IXQ5 586 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LRRC25Q8N386 305 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RELL2Q8NC24 303 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TANKQ92844 425 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ESAMQ96AP7 390 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PPWD1Q96BP3 646 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 WDR34Q96EX3 536 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 YIPF4Q9BSR8 244 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ERVK-6Q9BXR3 956 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CAB39LQ9H9S4 337 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 WDR41Q9HAD4 459 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CBLCQ9ULV8 474 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SNX12Q9UMY4 172 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CAMK2AQ9UQM7 478 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ERVK-19Q9WJR5 959 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ANGPTL3Q9Y5C1 460 aa11.93□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LRRC3CA6NJW4 275 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR6C76A6NM76 312 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SUPT3HB4E1H0 165 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PHGDHO43175 533 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SUPT3HO75486 399 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SCELO95171 688 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EPPINO95925 133 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 IGKV3-11P04433 115 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 KRT15P19012 456 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CD22P20273 847 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ADSLP30566 484 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NRG3P56975 720 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF267Q14586 743 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RPS6KA2Q15349 733 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TBCCQ15814 346 aa11.92□□□□□ -0.5
TNFRSF1A-207ENST00000535958 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms