RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 NATD1Q8N6N6 113 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 TMEM145Q8NBT3 493 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 OR2L3Q8NG85 312 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 OR10G2Q8NGC3 310 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 NDNFQ8TB73 568 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 ZBED6CLQ96FA7 236 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-202ENST00000535906 NIPSNAP1Q9BPW8 284 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 WDR12Q9GZL7 423 aaKnown RBP12.68□□□□□ -0.38
VPS33B-202ENST00000535906 AKIP1Q9NQ31 210 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 KLHL20Q9Y2M5 609 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 GLOD5A6NK44 160 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 KCNJ13O60928 360 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 ITGA2P17301 1181 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 GSSP48637 474 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 PSMD7P51665 324 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 VBP1P61758 197 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 KCNC4Q03721 635 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 ATP1A4Q13733 1029 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 PUM1Q14671 1186 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS33B-202ENST00000535906 GANABQ14697 944 aaKnown RBP12.68□□□□□ -0.38
VPS33B-202ENST00000535906 MAPK11Q15759 364 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 RAB30Q15771 203 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 ZIC1Q15915 447 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 DGUOKQ16854 277 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 MICAQ29983 383 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 AHSA2Q719I0 299 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 TTLQ8NG68 377 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 S100ZQ8WXG8 99 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 TMEM19Q96HH6 336 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 TBC1D29Q9UFV1 150 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 RNF6Q9Y252 685 aa12.68□□□□□ -0.38
VPS33B-202ENST00000535906 PRUNE2Q8WUY3 3088 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 OR2A25A4D2G3 310 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 HMGN4O00479 90 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 PCDH17O14917 1159 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 VIPP01282 170 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 CD72P21854 359 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 AK4P27144 223 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 GRK3P35626 688 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 CCT3P49368 545 aaKnown RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 LSM3P62310 102 aaKnown RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 SPDYE7PQ495Y7 208 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 LGI4Q8N135 537 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 OR9Q2Q8NGE9 314 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 DYNC2LI1Q8TCX1 351 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 DNASE1L2Q92874 299 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 MS4A6EQ96DS6 147 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 ZNF764Q96H86 408 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 PIP5K1AQ99755 562 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 GLIPR2Q9H4G4 154 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 SERHL2Q9H4I8 314 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 A4GALTQ9NPC4 353 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 TAS2R7Q9NYW3 318 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 RHCGQ9UBD6 479 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 FUOMA2VDF0 154 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 TOR1BO14657 336 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 ERI3O43414 337 aaKnown RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 GGT2P36268 569 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 GSTM5P46439 218 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 LIMS1P48059 325 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 SERPINB10P48595 397 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 TRA2BP62995 288 aaKnown RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 TP53BP2Q13625 1128 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 HTR4Q13639 388 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 LRRC32Q14392 662 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 TPRG1LQ5T0D9 272 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 MTSS1LQ765P7 747 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 ZNF605Q86T29 641 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 EGFL6Q8IUX8 553 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 P3H2Q8IVL5 708 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 APOBEC4Q8WW27 367 aaKnown RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 OR2M4Q96R27 311 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 PRDM7Q9NQW5 492 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 ACSS1Q9NUB1 689 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-202ENST00000535906 PLCXD1Q9NUJ7 323 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
VPS33B-202ENST00000535906 CLDN24A6NM45 220 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 C5orf58C9J3I9 102 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 SH3BP5O60239 455 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 NADKO95544 446 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ANXA8P13928 327 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ALDH4A1P30038 563 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 PTGER1P34995 402 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 SLC19A1P41440 591 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 HMGA2P52926 109 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 SLAMF1Q13291 335 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 TMEM35AQ53FP2 167 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 NIPAL1Q6NVV3 410 aa12.66□□□□□ -0.38
VPS33B-202ENST00000535906 ENPP7Q6UWV6 458 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms