RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 TIFAQ96CG3 184 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 PABPC5Q96DU9 382 aaKnown RBP6.29□□□□□ -1.4
USP28-202ENST00000535607 Q96MT0 163 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 SAMD11Q96NU1 681 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 ATOH8Q96SQ7 321 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 TKTL2Q9H0I9 626 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 KCNH6Q9H252 994 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 TUBB1Q9H4B7 451 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 RNF121Q9H920 327 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 IL1RAPQ9NPH3 570 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 SEMA4BQ9NPR2 832 aaPredicted RBP6.29□□□□□ -1.4
USP28-202ENST00000535607 C12orf4Q9NQ89 552 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 PIGVQ9NUD9 493 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 CLN6Q9NWW5 311 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 FBXL12Q9NXK8 326 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 ASIC5Q9NY37 505 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 CNOT2Q9NZN8 540 aaKnown RBP6.29□□□□□ -1.4
USP28-202ENST00000535607 CD274Q9NZQ7 290 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 PDP1Q9P0J1 537 aaPredicted RBP6.29□□□□□ -1.4
USP28-202ENST00000535607 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 GLS2Q9UI32 602 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 ST3GAL5Q9UNP4 418 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 RABL2BQ9UNT1 228 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 POFUT2Q9Y2G5 429 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 PKP3Q9Y446 797 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 CMAHPQ9Y471 501 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 PCDHGB3Q9Y5G1 929 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 KCNE2Q9Y6J6 123 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 SESN1Q9Y6P5 492 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 SHROOM3Q8TF72 1996 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 LTBP2Q14767 1821 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 COL4A6Q14031 1691 aa6.29□□□□□ -1.4
USP28-202ENST00000535607 A0A1W2PPL8 197 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 IRGMA1A4Y4 181 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 KIAA0355O15063 1070 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 ADAMDEC1O15204 470 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 INPPL1O15357 1258 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 ZNF623O75123 536 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 NDUFS3O75489 264 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 TUSC2O75896 110 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 ZNF682O95780 498 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 EPOP01588 193 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 AMY1AP04745 511 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 IFNA16P05015 189 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 FGF1P05230 155 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 LCKP06239 509 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PRPS2P11908 318 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PSMA1P25786 263 aaKnown RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 PCSK1P29120 753 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 GGT2P36268 569 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 KCNJ5P48544 419 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 LHX1P48742 406 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PXNP49023 591 aaPredicted RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 CDKN2DP55273 166 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 MAP3K7CLP57077 242 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 DAOAP59103 153 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 CDC42P60953 191 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 RPP38P78345 283 aaKnown RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 TLE2Q04725 743 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 LRRC74AQ0VAA2 488 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 DMC1Q14565 340 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SYT16Q17RD7 645 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 AP5B1Q2VPB7 878 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 ATXN7L2Q5T6C5 722 aaPredicted RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 NDUFAF5Q5TEU4 345 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 TRIQKQ629K1 86 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 METAP1DQ6UB28 335 aaPredicted RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 AFTPHQ6ULP2 937 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 IL27RAQ6UWB1 636 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 GCNT7Q6ZNI0 430 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 DOK3Q7L591 496 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 NRARPQ7Z6K4 114 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 GALNT5Q7Z7M9 940 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SERPINA11Q86U17 422 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PLXDC1Q8IUK5 500 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PM20D2Q8IYS1 436 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 RDH10Q8IZV5 341 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 CADM2Q8N3J6 435 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 DNAJC22Q8N4W6 341 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 NPWQ8N729 165 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 OR4L1Q8NH43 312 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SPATA22Q8NHS9 363 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 ANKRD49Q8WVL7 239 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 GTF2H4Q92759 462 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SNAPC3Q92966 411 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 PTERQ96BW5 349 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 IMP4Q96G21 291 aaKnown RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 MRGPRX4Q96LA9 322 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 C1orf74Q96LT6 269 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 OR2A14Q96R47 310 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 OR52E6Q96RD3 313 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 TRIB3Q96RU7 358 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 CHCHD6Q9BRQ6 235 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 TTYH2Q9BSA4 534 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 CDCA4Q9BXL8 241 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 GABARAPL3Q9BY60 117 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SIK2Q9H0K1 926 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 SMOC2Q9H3U7 446 aa6.28□□□□□ -1.4
USP28-202ENST00000535607 RANBP3Q9H6Z4 567 aaPredicted RBP6.28□□□□□ -1.4
USP28-202ENST00000535607 ELAC1Q9H777 363 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms