RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 ALOXE3Q9BYJ1 711 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 SERHL2Q9H4I8 314 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 MVB12BQ9H7P6 319 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 SLC35C2Q9NQQ7 365 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 PRDM8Q9NQV8 689 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 FAIMQ9NVQ4 179 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
NEK4-207ENST00000535191 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 GLOD5A6NK44 160 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 SCAMP1O15126 338 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 RNGTTO60942 597 aaKnown RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 STSP08842 583 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 MAT2AP31153 395 aaKnown RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 LIPAP38571 399 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 CRISP1P54107 249 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 CDC42P60953 191 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 ZNF846Q147U1 533 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 SYPL1Q16563 259 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 SZRD1Q7Z422 152 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 STX19Q8N4C7 294 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 DYNC2LI1Q8TCX1 351 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 APOOQ9BUR5 198 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 FAIM2Q9BWQ8 316 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 RHBDL2Q9NX52 303 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3DA0A087WVF3 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3IA0A087WXS9 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3EA0A087X179 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3KA0A087X1G2 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 PRAMEF27A3QJZ7 478 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3FA6NER0 549 aaPredicted RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 PRR19A6NJB7 356 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3LB9A6J9 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 M0R082 166 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 M0R129 80 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 PRICKLE3O43900 615 aaPredicted RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 SERPINB7O75635 380 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3HP0C7X1 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 CHMP24386 653 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 POU1F1P28069 291 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 RAB15P59190 212 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 ST3GAL4Q11206 333 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 SLAMF1Q13291 335 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBCEQ15813 527 aaPredicted RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3GQ6DHY5 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3CQ6IPX1 549 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 LINC00299Q6ZSB3 139 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 ADCK1Q86TW2 530 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 RBM45Q8IUH3 476 aaKnown RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 TBC1D3Q8IZP1 549 aaPredicted RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 ELSPBP1Q96BH3 223 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 COX4I2Q96KJ9 171 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 BBS4Q96RK4 519 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TREX2Q9BQ50 279 aaPredicted RBP13.11□□□□□ -0.31
NEK4-207ENST00000535191 SLC6A17Q9H1V8 727 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 OR51I1Q9H343 314 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 HMG20AQ9NP66 347 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 SLC6A20Q9NP91 592 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 EHD3Q9NZN3 535 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 TRPC4Q9UBN4 977 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 SEC14L3Q9UDX4 400 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 B3GNT3Q9Y2A9 372 aa13.11□□□□□ -0.31
NEK4-207ENST00000535191 ZAR1LA6NP61 321 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 EFCAB9A8MZ26 197 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 FAM227AF5H4B4 570 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 LINC01565O15544 149 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 ERI3O43414 337 aaKnown RBP13.1□□□□□ -0.31
NEK4-207ENST00000535191 PLRG1O43660 514 aaKnown RBP13.1□□□□□ -0.31
NEK4-207ENST00000535191 SEMA7AO75326 666 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 NR2F1P10589 423 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 CD72P21854 359 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 IGFALSP35858 605 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 SERPINB10P48595 397 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 NCBP2P52298 156 aaKnown RBP eCLIP13.1□□□□□ -0.31
NEK4-207ENST00000535191 ABATP80404 500 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 HYAL2Q12891 473 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 RPE65Q16518 533 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 DCDC5Q6ZRR9 648 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 TMEM145Q8NBT3 493 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 OR5D16Q8NGK9 328 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 OR8K5Q8NH50 307 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
NEK4-207ENST00000535191 RASSF5Q8WWW0 418 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 MS4A6EQ96DS6 147 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 SLC35G5Q96KT7 338 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 FZD3Q9NPG1 666 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 PRDM7Q9NQW5 492 aa13.1□□□□□ -0.31
NEK4-207ENST00000535191 ZCCHC3Q9NUD5 404 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms