RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ATP5B	P06576	529 aa	Known RBP	4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PLEK	P08567	350 aa	Predicted RBP	4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HAPLN1	P10915	354 aa	Predicted RBP	4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CTSC	P53634	463 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PTEN	P60484	403 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ACTG1	P63261	375 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC7A9	P82251	487 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	COG7	P83436	770 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PDE1B	Q01064	536 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RBPJ	Q06330	500 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TFF3	Q07654	80 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ACSM1	Q08AH1	577 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF155	Q12901	538 aa	Predicted RBP	4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE2B	Q13066	116 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PTPRCAP	Q14761	206 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NFATC4	Q14934	902 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C3AR1	Q16581	482 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE2E	Q4V326	116 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	XKR9	Q5GH70	373 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	EFHC1	Q5JVL4	640 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MPP7	Q5T2T1	576 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF776	Q68DI1	518 aa	Predicted RBP	4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE2A	Q6NT46	116 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ARMCX5	Q6P1M9	558 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TBC1D10C	Q8IV04	446 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MAP7D3	Q8IWC1	876 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	BBS7	Q8IWZ6	715 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LRRC75A-AS1	Q8N1F1	130 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PELI3	Q8N2H9	469 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CLIP4	Q8N3C7	705 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ABTB1	Q969K4	478 aa	Predicted RBP	4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TMEM143	Q96AN5	459 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OTUB2	Q96DC9	234 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C3orf30	Q96M34	536 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	QRFPR	Q96P65	431 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GBP5	Q96PP8	586 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	UBAC1	Q9BSL1	405 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	BBS2	Q9BXC9	721 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SEMA6A	Q9H2E6	1030 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZDHHC6	Q9H6R6	413 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PFDN4	Q9NQP4	134 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC38A7	Q9NVC3	462 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HIF1AN	Q9NWT6	349 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OCIAD1	Q9NX40	245 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE2D	Q9UEU5	116 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CSAG2	Q9Y5P2	127 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IGLV3-22	A0A075B6J6	115 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IDS	B3KWA1	339 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FAM86B1	E9PN63	330 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PRAMEF26	H0Y7S4	382 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CCDC188	H7C350	402 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	XRCC3	O43542	346 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR10H2	O60403	315 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KCNJ13	O60928	360 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MED24	O75448	989 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KDM4B	O94953	1096 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CSF2	P04141	144 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FAM86B2	P0C5J1	330 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF12	P17014	697 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ITGA2	P17301	1181 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CYP11B2	P19099	503 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IDS	P22304	550 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SFN	P31947	248 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RPL9	P32969	192 aa	Known RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HSPA4	P34932	840 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PCGF2	P35227	344 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PCYT1A	P49585	367 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PGGT1B	P53609	377 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC12A3	P55017	1021 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MBTD1	Q05BQ5	628 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TFDP1	Q14186	410 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MXD4	Q14582	209 aa	Predicted RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PLA2G4F	Q68DD2	849 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF425	Q6IV72	752 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IGFL3	Q6UXB1	125 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PPP1R21	Q6ZMI0	780 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MEPCE	Q7L2J0	689 aa	Known RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C1orf87	Q8N0U7	546 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CCAR2	Q8N163	923 aa	Known RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZADH2	Q8N4Q0	377 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	BCORP1	Q8N888	145 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ARL10	Q8N8L6	244 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC4A11	Q8NBS3	891 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF114	Q8NC26	417 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR52I2	Q8NH67	350 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	EXD1	Q8NHP7	514 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	BBS10	Q8TAM1	723 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FAM216A	Q8WUB2	273 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC38A5	Q8WUX1	472 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TCP11	Q8WWU5	503 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TANK	Q92844	425 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PIGT	Q969N2	578 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FAM81B	Q96LP2	452 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF778	Q96MU6	729 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF582	Q96NG8	517 aa	Predicted RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	AGAP3	Q96P47	875 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CITED2	Q99967	270 aa	Predicted RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	THUMPD3	Q9BV44	507 aa	Known RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	DPAGT1	Q9H3H5	408 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ACTL8	Q9H568	366 aa		4.12	□□□□□ -1.75

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