RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CLCN2P51788 898 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 RCAN2Q14206 197 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 QSOX2Q6ZRP7 698 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 OR7G3Q8NG95 312 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 TSEN15Q8WW01 171 aaKnown RBP16.47■□□□□ 0.23
PHRF1-206ENST00000534320 ITPKCQ96DU7 683 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 MSANTD3Q96H12 275 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 LIN28AQ9H9Z2 209 aaKnown RBP16.47■□□□□ 0.23
PHRF1-206ENST00000534320 SMOXQ9NWM0 555 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 GPR45Q9Y5Y3 372 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
PHRF1-206ENST00000534320 C1orf226A1L170 272 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 NUAK1O60285 661 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 DHPSP49366 369 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-206ENST00000534320 TMEM35AQ53FP2 167 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 CMPK2Q5EBM0 449 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 IER5LQ5T953 404 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 SHQ1Q6PI26 577 aaKnown RBP16.47■□□□□ 0.23
PHRF1-206ENST00000534320 C6orf120Q7Z4R8 191 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 C16orf78Q8WTQ4 265 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 TRIM43Q96BQ3 446 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-206ENST00000534320 PIP5K1AQ99755 562 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 OR2B2Q9GZK3 357 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 ARMC1Q9NVT9 282 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 ACSL6Q9UKU0 697 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 CDH7Q9ULB5 785 aa16.47■□□□□ 0.23
PHRF1-206ENST00000534320 CPED1A4D0V7 1026 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 OR6C74A6NCV1 312 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 CH25HO95992 272 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 ZNF3P17036 446 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 RPL6Q02878 288 aaKnown RBP16.46■□□□□ 0.23
PHRF1-206ENST00000534320 LRP8Q14114 963 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 TRAM2Q15035 370 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 CATSPEREQ5SY80 951 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 C6orf141Q5SZD1 244 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 NCSTNQ92542 709 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 PHOX2BQ99453 314 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 NDC1Q9BTX1 674 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 GDE1Q9NZC3 331 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
PHRF1-206ENST00000534320 DRD2P14416 443 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
PHRF1-206ENST00000534320 ZNF548Q8NEK5 533 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-206ENST00000534320 TSSK6Q9BXA6 273 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 DPAGT1Q9H3H5 408 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 ACTL8Q9H568 366 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 PCDHGB7Q9Y5F8 929 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 FBP2O00757 339 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 GATBO75879 557 aaKnown RBP16.46■□□□□ 0.23
PHRF1-206ENST00000534320 DEFB134Q4QY38 66 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 OR4C11Q6IEV9 310 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 CNIH3Q8TBE1 160 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 PHOSPHO2Q8TCD6 241 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 ZNF304Q9HCX3 659 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 TNFRSF10DQ9UBN6 386 aa16.46■□□□□ 0.23
PHRF1-206ENST00000534320 VSX2P58304 361 aaPredicted RBP16.46■□□□□ 0.22
PHRF1-206ENST00000534320 RAB5BP61020 215 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 HYAL2Q12891 473 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 OR5AR1Q8NGP9 310 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 MCHR1Q99705 422 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 INPP5KQ9BT40 448 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 TMEM30AQ9NV96 361 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 MED31Q9Y3C7 131 aa16.46■□□□□ 0.22
PHRF1-206ENST00000534320 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 OR5K4A6NMS3 321 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 XPNPEP2O43895 674 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 ABLIM3O94929 683 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 PRKACAP17612 351 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 CCKBRP32239 447 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 BMP8BP34820 402 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 TSTQ16762 297 aaKnown RBP16.45■□□□□ 0.22
PHRF1-206ENST00000534320 EXOC3L2Q2M3D2 409 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 BMP8AQ7Z5Y6 402 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.225e-7■■■■□ 25.5
PHRF1-206ENST00000534320 LSMEM2Q8N112 164 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 DTD2Q96FN9 168 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 OR51I1Q9H343 314 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 ZNF696Q9H7X3 374 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 BRF2Q9HAW0 419 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 MALT1Q9UDY8 824 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 RBMXL2O75526 392 aaKnown RBP16.45■□□□□ 0.22
PHRF1-206ENST00000534320 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-206ENST00000534320 ETFAP13804 333 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 NRG3P56975 720 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 RPS26P62854 115 aaKnown RBP16.45■□□□□ 0.22
PHRF1-206ENST00000534320 LRRC69Q6ZNQ3 347 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 CD180Q99467 661 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 DNMT3BQ9UBC3 853 aaKnown RBP16.45■□□□□ 0.22
PHRF1-206ENST00000534320 EMC8O43402 210 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 FHP07954 510 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 PORP16435 677 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-206ENST00000534320 CTSCP53634 463 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 AAK1Q2M2I8 961 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 GAREM2Q75VX8 874 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 GHDCQ8N2G8 530 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 DTWD1Q8N5C7 304 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 TCEANCQ8N8B7 351 aa16.45■□□□□ 0.22
PHRF1-206ENST00000534320 NUP43Q8NFH3 380 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms