RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 STX16O14662 325 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 ZFAND5O76080 213 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SNRPAP09012 282 aaKnown RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 RFPL3SP0C7P2 107 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 S1PR1P21453 382 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 PTX3P26022 381 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SERPINB3P29508 390 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 ARL1P40616 181 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 STT3AP46977 705 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 CCNG1P51959 295 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 RAP1GDS1P52306 607 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SKP1P63208 163 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 ZNF267Q14586 743 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 LTB4RQ15722 352 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 TMEM35AQ53FP2 167 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 GLE1Q53GS7 698 aaKnown RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 FRG2Q64ET8 278 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 TIFABQ6ZNK6 161 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SPPL2CQ8IUH8 684 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 ZCCHC7Q8N3Z6 543 aaKnown RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 TMEM156Q8N614 296 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 CDYL2Q8N8U2 506 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 PSD4Q8NDX1 1056 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 ADCY4Q8NFM4 1077 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 OR5M3Q8NGP4 307 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 DNAJB8Q8NHS0 232 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SUN3Q8TAQ9 357 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 EPS8L3Q8TE67 593 aaKnown RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SEC16BQ96JE7 1060 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 FRG2BQ96QU4 278 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 MRPL57Q9BQC6 102 aaKnown RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 NTMT1Q9BV86 223 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 CNPPD1Q9BV87 410 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 SHCBP1LQ9BZQ2 653 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 ANKZF1Q9H8Y5 726 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 TUBA8Q9NY65 449 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 CES1P1Q9UKY3 287 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 PTGDR2Q9Y5Y4 395 aa8.91□□□□□ -0.98
SSBP3-215ENST00000533946 V9GYY5 206 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 MAP1AP78559 2803 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-215ENST00000533946 TEP1Q99973 2627 aaKnown RBP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 PCNX3Q9H6A9 2034 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 MYO9AB2RTY4 2548 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 MANBAO00462 879 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 CDC40O60508 579 aaKnown RBP eCLIP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 GPR75O95800 540 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 CRYABP02511 175 aaKnown RBP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 ABHD2P08910 425 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 RBP1P09455 135 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 CREB1P16220 341 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 GSTM2P28161 218 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 SERPINB9P50453 376 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 SSR4P51571 173 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 HMGCS1Q01581 520 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 CLCQ05315 142 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 FOXO1Q12778 655 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 CUL3Q13618 768 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 EXOSC7Q15024 291 aaKnown RBP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 TERF2Q15554 542 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 NNATQ16517 81 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 ZNF678Q5SXM1 525 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 PRAMEF20Q5VT98 475 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 NIPAL1Q6NVV3 410 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 HSDL2Q6YN16 418 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 COMMD6Q7Z4G1 85 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 LSRQ86X29 649 aaPredicted RBP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 PRR22Q8IZ63 422 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 LGI4Q8N135 537 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 TMEM132CQ8N3T6 1108 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 MORN4Q8NDC4 146 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 ARMC2Q8NEN0 867 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 OR2M7Q8NG81 312 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 OR10G3Q8NGC4 313 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 OR14A16Q8NHC5 309 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 AGAP11Q8TF27 550 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 NUDT8Q8WV74 236 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 ATP6V1E2Q96A05 226 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 TM4SF18Q96CE8 201 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 APIPQ96GX9 242 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 MRPL46Q9H2W6 279 aaKnown RBP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 GSTO2Q9H4Y5 243 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 SH2D2AQ9NP31 389 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 SLC12A4Q9UP95 1085 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 YARS2Q9Y2Z4 477 aaKnown RBP8.9□□□□□ -0.98
SSBP3-215ENST00000533946 TSC22D4Q9Y3Q8 395 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 PCDHGB6Q9Y5F9 930 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 PCDHGA11Q9Y5H2 935 aa8.9□□□□□ -0.98
SSBP3-215ENST00000533946 C2orf72A6NCS6 295 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 B4DXG7 233 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 FOXE1O00358 373 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-215ENST00000533946 SMIM24O75264 130 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 KRT38O76015 456 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 SUPT7LO94864 414 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 GLSO94925 669 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-215ENST00000533946 NR2F6P10588 404 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 ALOX15P16050 662 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF24P17028 368 aa8.89□□□□□ -0.99
SSBP3-215ENST00000533946 ENDOUP21128 410 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms