RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ACAT2Q9BWD1 397 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNF700Q9H0M5 742 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 PCBD2Q9H0N5 130 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 CLEC4MQ9H2X3 399 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 LIME1Q9H400 295 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 TUBB1Q9H4B7 451 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 KLHL1Q9NR64 748 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 TRPS1Q9UHF7 1281 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 RNF6Q9Y252 685 aa10.59□□□□□ -0.71
TRAPPC4-213ENST00000533149 KCNE1BA0A087WTH5 132 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 LOC102723996A0A087X1L8 192 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 GOLGA8QA0A0J9YX86 632 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 A0A1W2PPV9 198 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 GOLGA8OA6NCC3 632 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 A8MUI8 341 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 GOLGA8NF8WBI6 632 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 MANBAO00462 879 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 FFAR3O14843 346 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 PIP5K1BO14986 540 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 GPR42O15529 346 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 SRPX2O60687 465 aaPredicted RBP10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 UGDHO60701 494 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 CHEK2O96017 543 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 LINC00032P0C843 101 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 C1GALT1C1LP0DN25 315 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 HTR6P50406 440 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 HSF1Q00613 529 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 TBCCQ15814 346 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 CPSF6Q16630 551 aaKnown RBP eCLIP10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 SGO1Q5FBB7 561 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 TCHHL1Q5QJ38 904 aaPredicted RBP10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 CATSPEREQ5SY80 951 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 ACAD11Q709F0 780 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 CHERPQ8IWX8 916 aaKnown RBP10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 DDIASQ8IXT1 998 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 HORMAD2Q8N7B1 307 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 MDS2Q8NDY4 140 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 GOT1L1Q8NHS2 421 aaPredicted RBP10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 FAM57AQ8TBR7 257 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 SLC5A11Q8WWX8 675 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 CCT6BQ92526 530 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 C3orf30Q96M34 536 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNF285Q96NJ3 590 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 OR52B2Q96RD2 323 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 UTP23Q9BRU9 249 aaKnown RBP10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 TUBB6Q9BUF5 446 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 CCDC28BQ9BUN5 200 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 MEAF6Q9HAF1 191 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 PFDN4Q9NQP4 134 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 C14orf105Q9NVL8 296 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 TAC3Q9UHF0 121 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 SH2B3Q9UQQ2 575 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNHIT1O43257 154 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 ULK1O75385 1050 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 HEXBP07686 556 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 CDH1P12830 882 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 ZNF24P17028 368 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 CD22P20273 847 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 FBLP22087 321 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 PSMB5P28074 263 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 EPHA3P29320 983 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 PTGS2P35354 604 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 HNF4AP41235 474 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 GRIA3P42263 894 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 YBX1P67809 324 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 TUBA3CQ13748 450 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 ABRAXAS2Q15018 415 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 OR1C1Q15619 314 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 LSM12Q3MHD2 195 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 GGTA1PQ4G0N0 100 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 ACER2Q5QJU3 275 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 WASHC2DQ5SRD0 308 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 NXNQ6DKJ4 435 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 GRHL2Q6ISB3 625 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 TUBA3EQ6PEY2 450 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 C17orf64Q86WR6 236 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 HOMEZQ8IX15 550 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 BEST3Q8N1M1 668 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 MARVELD2Q8N4S9 558 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 OR2A1Q8NGT9 310 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 ACTRT2Q8TDY3 377 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 STON2Q8WXE9 905 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 WDR34Q96EX3 536 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 PTCD3Q96EY7 689 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 IMMP1LQ96LU5 166 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 SIGLEC12Q96PQ1 595 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 TCF7L2Q9NQB0 619 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 FARSBQ9NSD9 589 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 CDC14AQ9UNH5 594 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 SNX6Q9UNH7 406 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 PTGDR2Q9Y5Y4 395 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 CSPG4Q6UVK1 2322 aa10.58□□□□□ -0.72
TRAPPC4-213ENST00000533149 ATP6AP2A0A1C7CYW4 349 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 CCT8L1PA6NM43 557 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 H7BY64 318 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 EBAG9O00559 213 aa10.57□□□□□ -0.72
TRAPPC4-213ENST00000533149 ATP6AP2O75787 350 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms