RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 IKBIPQ70UQ0 350 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 R3HCC1LQ7Z5L2 792 aaKnown RBP17.45■□□□□ 0.38
SMPD1-208ENST00000533123 GLRX5Q86SX6 157 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 MICU2Q8IYU8 434 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 PPWD1Q96BP3 646 aaKnown RBP17.45■□□□□ 0.38
SMPD1-208ENST00000533123 TM4SF18Q96CE8 201 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 RNF31Q96EP0 1072 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 SCOCQ9UIL1 159 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 SERTAD3Q9UJW9 196 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 NAALAD2Q9Y3Q0 740 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 PCDHGA1Q9Y5H4 931 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 COL27A1Q8IZC6 1860 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-208ENST00000533123 FITM1A5D6W6 292 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 MT-ND1P03886 318 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 ITGA1P56199 1179 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 HBA1P69905 142 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 OLR1P78380 273 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 ACY1Q03154 408 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 GRM7Q14831 915 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 SLC9A5Q14940 896 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 MTX3Q5HYI7 312 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 AP1ARQ63HQ0 302 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 SLCO6A1Q86UG4 719 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 GPR135Q8IZ08 494 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 GALNT15Q8N3T1 639 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 SEPHS2Q99611 448 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 EFHD1Q9BUP0 239 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 FANCEQ9HB96 536 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 MIEF1Q9NQG6 463 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 ATAD3AQ9NVI7 634 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 C5AR2Q9P296 337 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 AK5Q9Y6K8 562 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 C1orf226A1L170 272 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 GPIP06744 558 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 FAM58BPP0C7Q3 252 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 ALDH9A1P49189 494 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 POLE2P56282 527 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 SHISA5Q8N114 240 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 ZCCHC7Q8N3Z6 543 aaKnown RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 OR9A4Q8NGU2 314 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 GATA6Q92908 595 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 UCN3Q969E3 161 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 DPH2Q9BQC3 489 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 VCX3BQ9H321 246 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 TEX10Q9NXF1 929 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 SIDT1Q9NXL6 827 aaKnown RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 FBXW2Q9UKT8 454 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 DTNAQ9Y4J8 743 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 A0A0A6YYC8 382 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 SPAARA0A1B0GVQ0 90 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 FAM149AA5PLN7 773 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 I3L1I5 382 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 SGK494L7N484 410 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 CXCR6O00574 342 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 GALR3O60755 368 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 ROR2Q01974 943 aaKnown RBP17.44■□□□□ 0.38
SMPD1-208ENST00000533123 ABHD18Q0P651 414 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 FOXB2Q5VYV0 432 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 GPR155Q7Z3F1 870 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 FAM86B1Q8N7N1 296 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 GOLM1Q8NBJ4 401 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 AGBL5Q8NDL9 886 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 TPT1P8Q9HAU6 139 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 ANKHQ9HCJ1 492 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 ANAPC2Q9UJX6 822 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 AP3M1Q9Y2T2 418 aa17.44■□□□□ 0.38
SMPD1-208ENST00000533123 EFCAB7A8K855 629 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 EVPLLA8MZ36 301 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 FOXS1O43638 330 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 SCELO95171 688 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 DDCP20711 480 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 IL10P22301 178 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 RPL3P39023 403 aaKnown RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 NDUFA9Q16795 377 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 IRAK1BP1Q5VVH5 260 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 TTLL10Q6ZVT0 673 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ERMP1Q7Z2K6 904 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 TMEM126BQ8IUX1 230 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 METTL27Q8N6F8 245 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 TTC29Q8NA56 475 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 TNIP2Q8NFZ5 429 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 OR5T3Q8NGG3 340 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 NCLNQ969V3 563 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 MTERF3Q96E29 417 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 REXO5Q96IC2 774 aaKnown RBP17.43■□□□□ 0.38
SMPD1-208ENST00000533123 PHF12Q96QT6 1004 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 SERINC2Q96SA4 455 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 MAPKAP1Q9BPZ7 522 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ROGDIQ9GZN7 287 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 APMAPQ9HDC9 416 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 VPS4AQ9UN37 437 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ATG4BQ9Y4P1 393 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ASB4Q9Y574 426 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ZNF749O43361 778 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 B3GALT2O43825 422 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 PEX1O43933 1283 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 GMNNO75496 209 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 NTRK1P04629 796 aa17.43■□□□□ 0.38
SMPD1-208ENST00000533123 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms