RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 IGKV3-11P04433 115 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 SLCO1A2P46721 670 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 RASA2Q15283 850 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 CCNYL2Q5T2Q4 361 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 OR52E8Q6IFG1 317 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 TDRPQ86YL5 185 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 SIAH3Q8IW03 269 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 SULF2Q8IWU5 870 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 CDYL2Q8N8U2 506 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 RELTQ969Z4 430 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 L3HYPDHQ96EM0 354 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 ART5Q96L15 291 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 ANKZF1Q9H8Y5 726 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 TIMMDC1Q9NPL8 285 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 HPF1Q9NWY4 346 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 TEX10Q9NXF1 929 aaPredicted RBP28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 NPIPA1Q9UND3 350 aa28.1■■■□□ 2.09
SSSCA1-207ENST00000533115 DIDO1Q9BTC0 2240 aaKnown RBP28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 NBPF19A0A087WUL8 3843 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 KLRC4-KLRK1H3BQV0 150 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 PGRMC2O15173 223 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 OR10H2O60403 315 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 GLRA3O75311 464 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 OR6B1O95007 311 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 ZNF24P17028 368 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 MEOX1P50221 254 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 ZNF800Q2TB10 664 aaPredicted RBP eCLIP28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 FAM219BQ5XKK7 198 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 IL20RBQ6UXL0 311 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 SH2D5Q6ZV89 423 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 GPRIN3Q6ZVF9 776 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 COMMD6Q7Z4G1 85 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 POGLUT1Q8NBL1 392 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 FBXL20Q96IG2 436 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 NMRK1Q9NWW6 199 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 EMCNQ9ULC0 261 aa28.09■■■□□ 2.09
SSSCA1-207ENST00000533115 HRKO00198 91 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 MANBAO00462 879 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 PEX1O43933 1283 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 KRT15P19012 456 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 SOX3P41225 446 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 SPRED3Q2MJR0 410 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 RNFT1Q5M7Z0 435 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 STK38LQ9Y2H1 464 aa28.08■■■□□ 2.09
SSSCA1-207ENST00000533115 TRGV8A0A0C4DH27 118 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 SMIM23A6NLE4 172 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 CLDN1O95832 211 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 KRT6AP02538 564 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 KRT6BP04259 564 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 SLC35E2P0CK97 266 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 GALNSP34059 522 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 KRT6CP48668 564 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 GALNT1Q10472 559 aaPredicted RBP28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 TBL3Q12788 808 aaKnown RBP28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 TCHHL1Q5QJ38 904 aaPredicted RBP28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 NDUFAF5Q5TEU4 345 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 C9orf40Q8IXQ3 194 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 PSD4Q8NDX1 1056 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 NUBPLQ8TB37 319 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 DOK4Q8TEW6 326 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 RIT1Q92963 219 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 HBEGFQ99075 208 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 CNPPD1Q9BV87 410 aa28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.07■■■□□ 2.08
SSSCA1-207ENST00000533115 G3V2L1 256 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 ASNA1O43681 348 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 HSD3B1P14060 373 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 HSD3B2P26439 372 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 MAPK12P53778 367 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 ERVK-8P63133 956 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 LCP2Q13094 533 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 ZNF267Q14586 743 aaPredicted RBP28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 MPEG1Q2M385 716 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 MAMDC2Q7Z304 686 aaPredicted RBP28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 METTL6Q8TCB7 284 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 EPS8L3Q8TE67 593 aaKnown RBP28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 CCDC126Q96EE4 140 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 VPS29Q9UBQ0 182 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 ERVK-19Q9WJR5 959 aa28.06■■■□□ 2.08
SSSCA1-207ENST00000533115 SLC19A2O60779 497 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 GUCY1B2O75343 617 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 MYL2P10916 166 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 PIK3R1P27986 724 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 HMOX2P30519 316 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 CA7P43166 264 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 CCT5P48643 541 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 PKNOX1P55347 436 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 GPR85P60893 370 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 PIGGQ5H8A4 983 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 HIST2H2BCQ6DN03 193 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 ZYG11AQ6WRX3 759 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 OR4K14Q8NGD5 310 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 GSTO2Q9H4Y5 243 aa28.05■■■□□ 2.08
SSSCA1-207ENST00000533115 ZNF354AO60765 605 aaPredicted RBP28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 ZG16O60844 167 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 ULK1O75385 1050 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 PROCP04070 461 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 CRHR1P34998 444 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 RFC3P40938 356 aa28.04■■■□□ 2.08
SSSCA1-207ENST00000533115 ASPHQ12797 758 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms