RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 KRT74Q7RTS7 529 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 ZNF438Q7Z4V0 828 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 BBS10Q8TAM1 723 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 GNPDA2Q8TDQ7 276 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 OR2A14Q96R47 310 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 DMRT3Q9NQL9 472 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 WDR70Q9NW82 654 aa8.96□□□□□ -0.97
BDNF-216ENST00000532997 DIMT1Q9UNQ2 313 aaKnown RBP8.96□□□□□ -0.97
BDNF-216ENST00000532997 ISM1B1AKI9 464 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 J3KTA2 159 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 CRYZL1O95825 349 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SRCP12931 536 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 PTBP1P26599 531 aaKnown RBP eCLIP8.96□□□□□ -0.98
BDNF-216ENST00000532997 ACVR2AP27037 513 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SSR2P43308 183 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 CCT3P49368 545 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 CSTF1Q05048 431 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 RAB40BQ12829 278 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 GPR50Q13585 617 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 OCLNQ16625 522 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SLC5A12Q1EHB4 618 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SERPINA13PQ6UXR4 307 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 C16orf62Q7Z3J2 963 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 C10orf111Q8N326 155 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 WDR20Q8TBZ3 569 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SETD7Q8WTS6 366 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 SCAMP4Q969E2 229 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 GLYATL1Q969I3 302 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 OPALINQ96PE5 141 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 ZCCHC3Q9NUD5 404 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 FKBP14Q9NWM8 211 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 NDUFB11Q9NX14 153 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 AKAP7Q9P0M2 348 aaPredicted RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 CLCA3PQ9Y6N3 262 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 MAU2Q9Y6X3 613 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SEMG1P04279 462 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 BMP7P18075 431 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 STOMP27105 288 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 HSD17B2P37059 387 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 STAT5AP42229 794 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SF1Q15637 639 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 ZNF311Q5JNZ3 666 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 C3orf38Q5JPI3 329 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SDE2Q6IQ49 451 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 NXPE4Q6UWF7 544 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 PLEKHM3Q6ZWE6 761 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 IQCHQ86VS3 1027 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 NANOGP1Q8N7R0 232 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 NEIL3Q8TAT5 605 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SLC25A46Q96AG3 418 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 CREB3L1Q96BA8 519 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 ACAT2Q9BWD1 397 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 POLDIP3Q9BY77 421 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 SRRQ9GZT4 340 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 DPAGT1Q9H3H5 408 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 RANBP3Q9H6Z4 567 aaPredicted RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.96□□□□□ -0.98
BDNF-216ENST00000532997 RBFOX1Q9NWB1 397 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 TXNL4BQ9NX01 149 aaKnown RBP8.96□□□□□ -0.98
BDNF-216ENST00000532997 PRKAG2Q9UGJ0 569 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 SPEF1Q9Y4P9 236 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 PCDHGB7Q9Y5F8 929 aa8.96□□□□□ -0.98
BDNF-216ENST00000532997 POLR1CO15160 346 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 PRODHO43272 600 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 SSNA1O43805 119 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 FURINP09958 794 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 SRP54P61011 504 aaKnown RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 PCDH1Q08174 1060 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 TMEM115Q12893 351 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 IRF3Q14653 427 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 PLK5Q496M5 336 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 COX20Q5RI15 118 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 TIGD3Q6B0B8 471 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 Q6ZVU0 165 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 C6orf120Q7Z4R8 191 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 IFNL1Q8IU54 200 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 CCDC71Q8IV32 467 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 FAM217AQ8IXS0 508 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 CPXM2Q8N436 756 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 BTN2A2Q8WVV5 523 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 SMPDL3AQ92484 453 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 SLC9A6Q92581 669 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 CIDECQ96AQ7 238 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 C11orf24Q96F05 449 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 MED30Q96HR3 178 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 ZNF354BQ96LW1 612 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 MKRN2Q9H000 416 aaKnown RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 C11orf54Q9H0W9 315 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 RC3H2Q9HBD1 1191 aaKnown RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 PATJQ8NI35 1801 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 FAM170BA6NMN3 283 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 NEDD8-MDP1E9PL57 170 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 CACNB4O00305 520 aaPredicted RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 EFCAB14O75071 495 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 IFNA7P01567 189 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 CLTBP09497 229 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 FEN1P39748 380 aaKnown RBP8.95□□□□□ -0.98
BDNF-216ENST00000532997 MTNR1AP48039 350 aa8.95□□□□□ -0.98
BDNF-216ENST00000532997 STK19P49842 368 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms