RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 VN1R5Q7Z5H4 357 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SVBPQ8N300 66 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TMEM151AQ8N4L1 468 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PQLC3Q8N755 202 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM110BQ8TC76 370 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SUSD6Q92537 303 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PSMG2Q969U7 264 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ACTR6Q9GZN1 396 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 POLMQ9NP87 494 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 EMC7Q9NPA0 242 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SDR39U1Q9NRG7 319 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ABCD2Q9UBJ2 740 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 NDRG3Q9UGV2 375 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SCP2D1Q9UJQ7 156 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM50BQ9Y247 325 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PCDHGC4Q9Y5F7 938 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A0B4J203 849 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 KANTRA0A1W2PQU2 76 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 IRGMA1A4Y4 181 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CDC7O00311 574 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ANKRD28O15084 1053 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 RLN2P04090 185 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HRGP04196 525 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CAPNS1P04632 268 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TPOP07202 933 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ACSM4P0C7M7 580 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 DDX6P26196 483 aaKnown RBP eCLIP6.5□□□□□ -1.375e-8■■■■□ 23.4
TGFBR3-209ENST00000532540 AQP1P29972 269 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ARRB2P32121 409 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 MAGEA6P43360 314 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CDH12P55289 794 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PTSQ03393 145 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 EIF4HQ15056 248 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 LIPKQ5VXJ0 399 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 C22orf42Q6IC83 251 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 LETMD1Q6P1Q0 360 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CNIH2Q6PI25 160 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TMEM65Q6PI78 240 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 FIP1L1Q6UN15 594 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ENTHD1Q8IYW4 607 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 KCT2Q8NC54 265 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 OR8J3Q8NGG0 315 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SPATA22Q8NHS9 363 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 EEF1AKMT1Q8WVE0 214 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HLA-CQ95604 372 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 GTPBP3Q969Y2 492 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 MARC2Q969Z3 335 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 RTP4Q96DX8 246 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 LRRC46Q96FV0 321 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PANX1Q96RD7 426 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 IL4I1Q96RQ9 567 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PEBP4Q96S96 227 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CDX2Q99626 313 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC19A3Q9BZV2 496 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 AMBRA1Q9C0C7 1298 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D17Q9HA65 648 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HEBP1Q9NRV9 189 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 MGAT4CQ9UBM8 478 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 EVLQ9UI08 416 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TNPO3Q9Y5L0 923 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SCN1AP35498 2009 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 MROH6A6NGR9 719 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TUBAL3A6NHL2 446 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TEX46H3BTG2 121 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 IRAK2O43187 625 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ATG13O75143 517 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CCNDBP1O95273 360 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ALDOBP05062 364 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TYRP14679 529 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CCR2P41597 374 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CDH4P55283 916 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CTAG1AP78358 180 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TANGO2Q6ICL3 276 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ALKAL2Q6UX46 152 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 LIPIQ6XZB0 460 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PGAP1Q75T13 922 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SZRD1Q7Z422 152 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 DCBLD1Q8N8Z6 715 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HMGB4Q8WW32 186 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 WBP2Q969T9 261 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 RADILQ96JH8 1075 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 FCRL3Q96P31 734 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 OR2M2Q96R28 347 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HBEGFQ99075 208 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 GDF15Q99988 308 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 MAGIXQ9H6Y5 334 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 LYARQ9NX58 379 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SPHK1Q9NYA1 384 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC25A13Q9UJS0 675 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PCDHB9Q9Y5E1 797 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PCDHGB1Q9Y5G3 927 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 K7ERQ8 282 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SULT1C2O00338 296 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 ULK1O75385 1050 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 CKMT1AP12532 417 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 POU3F3P20264 500 aaPredicted RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 PAICSP22234 425 aaKnown RBP6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC1A2P43004 574 aa6.49□□□□□ -1.37
TGFBR3-209ENST00000532540 BLOC1S1P78537 153 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms