RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TRIM3O75382 744 aaPredicted RBP19.3■□□□□ 0.68
CHKA-206ENST00000531341 PRKRAO75569 313 aaKnown RBP19.3■□□□□ 0.68
CHKA-206ENST00000531341 ACSL3O95573 720 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 CPN2P22792 545 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 GDF1P27539 372 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 GGT5P36269 586 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 DCAF7P61962 342 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 PPP1R7Q15435 360 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 STEAP4Q687X5 459 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 BICRALQ6AI39 1079 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 TMEM64Q6YI46 380 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 MAATS1Q7Z4T9 603 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 ADAMTSL2Q86TH1 951 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 LACC1Q8IV20 430 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 ZNF473Q8WTR7 871 aaKnown RBP19.3■□□□□ 0.68
CHKA-206ENST00000531341 WDR34Q96EX3 536 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 PTCD3Q96EY7 689 aaKnown RBP19.3■□□□□ 0.68
CHKA-206ENST00000531341 DOHHQ9BU89 302 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 CAPS2Q9BXY5 557 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 MS4A8Q9BY19 250 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 CNIH4Q9P003 139 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 FOXD3Q9UJU5 478 aaPredicted RBP19.3■□□□□ 0.68
CHKA-206ENST00000531341 SLC6A5Q9Y345 797 aa19.3■□□□□ 0.68
CHKA-206ENST00000531341 CLCA1A8K7I4 914 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 TGFB1P01137 390 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 IL2RAP01589 272 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 CLPSP04118 112 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 HIST1H1TP22492 207 aaPredicted RBP19.29■□□□□ 0.68
CHKA-206ENST00000531341 IVDP26440 423 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 HPDP32754 393 aaPredicted RBP19.29■□□□□ 0.68
CHKA-206ENST00000531341 MSH2P43246 934 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 FNTAP49354 379 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 NSUN5P2Q63ZY6 315 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 CIARTQ8N365 385 aaPredicted RBP19.29■□□□□ 0.68
CHKA-206ENST00000531341 VWA5B2Q8N398 1253 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 RNF175Q8N4F7 328 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 SLC15A4Q8N697 577 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 SNX31Q8N9S9 440 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 GRK7Q8WTQ7 553 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 LRRC46Q96FV0 321 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 GAL3ST4Q96RP7 486 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 TBCDQ9BTW9 1192 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 PRDM14Q9GZV8 571 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 NEUROD4Q9HD90 331 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 WWOXQ9NZC7 414 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 JKAMPQ9P055 326 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 TEX264Q9Y6I9 313 aa19.29■□□□□ 0.68
CHKA-206ENST00000531341 PGRMC1O00264 195 aaKnown RBP19.28■□□□□ 0.68
CHKA-206ENST00000531341 TRAPPC6AO75865 159 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 PIAS1O75925 651 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 SCELO95171 688 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 LY6G6DO95868 133 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 HRGP04196 525 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 COX7A2P14406 83 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 HERVK_113P63132 956 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 ERVK-8P63133 956 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 NKX6-1P78426 367 aaPredicted RBP19.28■□□□□ 0.68
CHKA-206ENST00000531341 TGM3Q08188 693 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 SLAMF1Q13291 335 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 PCBP2Q15366 365 aaKnown RBP eCLIP19.28■□□□□ 0.681e-6■■■□□ 18.2
CHKA-206ENST00000531341 NTRK2Q16620 822 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 DCST1Q5T197 706 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 FNDC7Q5VTL7 733 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 C18orf63Q68DL7 685 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 ANKMY2Q8IV38 441 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 BBOF1Q8ND07 529 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 FBXL20Q96IG2 436 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 GNRHR2Q96P88 292 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 TRIB1Q96RU8 372 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 ERVK-6Q9BXR3 956 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 ROGDIQ9GZN7 287 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 CAMK2AQ9UQM7 478 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 ERVK-19Q9WJR5 959 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 ZANQ9Y493 2812 aa19.28■□□□□ 0.68
CHKA-206ENST00000531341 WISP3O95389 354 aaPredicted RBP19.27■□□□□ 0.68
CHKA-206ENST00000531341 HEXAP06865 529 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 SERPINB3P29508 390 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 SOX18P35713 384 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 ZNF267Q14586 743 aaPredicted RBP19.27■□□□□ 0.68
CHKA-206ENST00000531341 OR4D1Q15615 310 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 VASNQ6EMK4 673 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 CXorf67Q86X51 503 aaPredicted RBP19.27■□□□□ 0.68
CHKA-206ENST00000531341 UCN3Q969E3 161 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 RBM18Q96H35 190 aaKnown RBP19.27■□□□□ 0.68
CHKA-206ENST00000531341 MCMBPQ9BTE3 642 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 EFCAB11Q9BUY7 163 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 WWTR1Q9GZV5 400 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 OR51B5Q9H339 312 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 UBQLN3Q9H347 655 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 RPF2Q9H7B2 306 aaKnown RBP19.27■□□□□ 0.68
CHKA-206ENST00000531341 ZNF395Q9H8N7 513 aaPredicted RBP19.27■□□□□ 0.68
CHKA-206ENST00000531341 CAB39LQ9H9S4 337 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 NINQ8N4C6 2090 aa19.27■□□□□ 0.68
CHKA-206ENST00000531341 EEF1E1-BLOC1S5C9J1V9 151 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 EEF1E1O43324 174 aaKnown RBP19.26■□□□□ 0.67
CHKA-206ENST00000531341 STK16O75716 305 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 HPNP05981 417 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 BMP7P18075 431 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 CTSSP25774 331 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms