RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RMND5AQ9H871 391 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 NECTIN3Q9NQS3 549 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 FAM120CQ9NX05 1096 aaKnown RBP17.88■□□□□ 0.45
SMPD1-205ENST00000531303 DYTNA2CJ06 578 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 BLACEA4D250 179 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 SCN2BO60939 215 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 GSNP06396 782 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 CPMP14384 443 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 TCN2P20062 427 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 PPP2R1BP30154 601 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 HSD17B7P56937 341 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 PCBP4P57723 403 aaKnown RBP17.88■□□□□ 0.45
SMPD1-205ENST00000531303 CAMK2BQ13554 666 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 OR4A15Q8NGL6 344 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 CT55Q8WUE5 264 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 FKBP10Q96AY3 582 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 PPWD1Q96BP3 646 aaKnown RBP17.88■□□□□ 0.45
SMPD1-205ENST00000531303 ZNF764Q96H86 408 aaPredicted RBP17.88■□□□□ 0.45
SMPD1-205ENST00000531303 ZNF681Q96N22 645 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 ALOXE3Q9BYJ1 711 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 TGIF2Q9GZN2 237 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 NRSN2Q9GZP1 204 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 VN1R1Q9GZP7 353 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 GLIPR2Q9H4G4 154 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 EFCAB1Q9HAE3 211 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 PRDM9Q9NQV7 894 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 SLAMF8Q9P0V8 285 aa17.88■□□□□ 0.45
SMPD1-205ENST00000531303 IGLV3-12A0A075B6K2 115 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 TRABD2BA6NFA1 517 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ERICH4A6NGS2 130 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 BBIP1A8MTZ0 92 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 CDRT15L2A8MXV6 281 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 MYO1GB0I1T2 1018 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 B2RBV5 119 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 STMND1H3BQB6 276 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 RNASET2O00584 256 aaKnown RBP17.87■□□□□ 0.45
SMPD1-205ENST00000531303 BRINP1O60477 761 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 RAD1O60671 282 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ALBP02768 609 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 HEXBP07686 556 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 PORP16435 677 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-205ENST00000531303 CALB2P22676 271 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 CDKN2CP42773 168 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 NUDT2P50583 147 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 EFNA3P52797 238 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 RHAGQ02094 409 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 BNIP1Q12981 228 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ART3Q13508 389 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 NFYCQ13952 458 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 NCF4Q15080 339 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ZSCAN26Q16670 478 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 MRPL14Q6P1L8 145 aaKnown RBP17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ZNF517Q6ZMY9 492 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-205ENST00000531303 NLGN4XQ8N0W4 816 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ESX1Q8N693 406 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ADCY4Q8NFM4 1077 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 NLGN4YQ8NFZ3 816 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-205ENST00000531303 FBXO27Q8NI29 283 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 GTF2H4Q92759 462 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ZBED6CLQ96FA7 236 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-205ENST00000531303 AMDHD1Q96NU7 426 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 PANX1Q96RD7 426 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 TUBB6Q9BUF5 446 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 B3GNT4Q9C0J1 378 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 ASCL3Q9NQ33 180 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 SERHLQ9NQF3 203 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 C14orf105Q9NVL8 296 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 MAP10Q9P2G4 905 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 PCDHGB4Q9UN71 923 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 MMACHCQ9Y4U1 282 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 PCDHGA7Q9Y5G6 932 aa17.87■□□□□ 0.45
SMPD1-205ENST00000531303 VSTM2BA6NLU5 285 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 RFXANKO14593 260 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 OR10H2O60403 315 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 ANP32DO95626 131 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 RECKO95980 971 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 IFNA16P05015 189 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 NT5EP21589 574 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 MPIP34949 423 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 GPC1P35052 558 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 EMP2P54851 167 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 LTB4RQ15722 352 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 NSDHLQ15738 373 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 QSOX2Q6ZRP7 698 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 SCUBE1Q8IWY4 988 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 LRRC25Q8N386 305 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-205ENST00000531303 NATD1Q8N6N6 113 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 ENDOVQ8N8Q3 282 aaKnown RBP17.86■□□□□ 0.45
SMPD1-205ENST00000531303 OR9A2Q8NGT5 310 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 ZFP28Q8NHY6 868 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 OR5P2Q8WZ92 322 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 CRB3Q9BUF7 120 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 SCNM1Q9BWG6 230 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 SLC26A1Q9H2B4 701 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 BTNL2Q9UIR0 455 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 C3orf18Q9UK00 162 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 PTRH2Q9Y3E5 179 aaKnown RBP17.86■□□□□ 0.45
SMPD1-205ENST00000531303 SNX8Q9Y5X2 465 aa17.86■□□□□ 0.45
SMPD1-205ENST00000531303 A8MUA0 341 aa17.85■□□□□ 0.45
SMPD1-205ENST00000531303 IDSB3KWA1 339 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms