RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 EPS8L3Q8TE67 593 aaKnown RBP7.48□□□□□ -1.21
CD44-232ENST00000531118 SLC44A1Q8WWI5 657 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 ASB11Q8WXH4 323 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 DAZLQ92904 295 aaKnown RBP7.48□□□□□ -1.21
CD44-232ENST00000531118 INTS12Q96CB8 462 aaKnown RBP7.48□□□□□ -1.21
CD44-232ENST00000531118 IQCDQ96DY2 449 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 ZC3HAV1LQ96H79 300 aaKnown RBP7.48□□□□□ -1.21
CD44-232ENST00000531118 FAM111AQ96PZ2 611 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 CSF3RQ99062 836 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 TUBA1CQ9BQE3 449 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 OSBPL8Q9BZF1 889 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 AICDAQ9GZX7 198 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 SLCO5A1Q9H2Y9 848 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 UBQLN3Q9H347 655 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 ACBD3Q9H3P7 528 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 TREX1Q9NSU2 369 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 CLCF1Q9UBD9 225 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 ZFP69BQ9UJL9 534 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 PCDHA13Q9Y5I0 950 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 CLCA3PQ9Y6N3 262 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 PKD1L1Q8TDX9 2849 aa7.48□□□□□ -1.21
CD44-232ENST00000531118 CADP27708 2225 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 A0A096LPE4 126 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 A0A1W2PNV4 684 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 A0A1W2PPZ6 126 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 URADA6NGE7 173 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 ERI2A8K979 691 aaKnown RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 H0Y3Z8 333 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 GFYI3L273 518 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 MSTNO14793 375 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 GPRIN2O60269 458 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 TRIM3O75382 744 aaPredicted RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 DEAF1O75398 565 aaPredicted RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 TRAPPC6AO75865 159 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 RCBTB2O95199 551 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 IFNA16P05015 189 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 PGRP06401 933 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 SMIM10L1P0DMW3 83 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 SRD5A1P18405 259 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 ARNTP27540 789 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 IDUAP35475 653 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 CCR8P51685 355 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 CLCN7P51798 805 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 MTTPP55157 894 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 CASP9P55211 416 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 REEP5Q00765 189 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 NR1I3Q14994 352 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 SETDB1Q15047 1291 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 TCEAL1Q15170 157 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 MPEG1Q2M385 716 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 EIPR1Q53HC9 387 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 PIGGQ5H8A4 983 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 BEX5Q5H9J7 111 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 TOR1AIP1Q5JTV8 583 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 CLEC17AQ6ZS10 378 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 UBE2R2Q712K3 238 aaPredicted RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 PIWIL4Q7Z3Z4 852 aaKnown RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 CAND1Q86VP6 1230 aaKnown RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 C9orf40Q8IXQ3 194 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 ABHD11Q8NFV4 315 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 OR8K1Q8NGG5 319 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 GABPB2Q8TAK5 448 aaPredicted RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 NUBPLQ8TB37 319 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 ZPLD1Q8TCW7 415 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 PTPMT1Q8WUK0 201 aaPredicted RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 CAVIN3Q969G5 261 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 ABTB1Q969K4 478 aaPredicted RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 SMIM10Q96HG1 83 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 RUNDC3BQ96NL0 473 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 TM9SF2Q99805 663 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 SGPP1Q9BX95 441 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 SHARPINQ9H0F6 387 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 AMFRQ9UKV5 643 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 LAMP3Q9UQV4 416 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 MRPS33Q9Y291 106 aaKnown RBP7.47□□□□□ -1.21
CD44-232ENST00000531118 EFR3BQ9Y2G0 817 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 C15orf41Q9Y2V0 281 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 PLCE1Q9P212 2302 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 ALPK2Q86TB3 2170 aa7.47□□□□□ -1.21
CD44-232ENST00000531118 NOTCH1P46531 2555 aa7.46□□□□□ -1.21
CD44-232ENST00000531118 A0A0G2JN53 185 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 MYOCOSA0A1B0GUC4 107 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 C17orf105B2RV13 164 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 LINC01387J3KSC0 135 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 ZBTB14O43829 449 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 AKR1B10O60218 316 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 ADAM11O75078 769 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 PLAUP00749 431 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 SERPINC1P01008 464 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 IGHV4-39P01824 125 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 C1QAP02745 245 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 ENO3P13929 434 aaPredicted RBP7.46□□□□□ -1.22
CD44-232ENST00000531118 POU2F1P14859 743 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 CCND1P24385 295 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 AHRP35869 848 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 UGT2B10P36537 528 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 CDKN1AP38936 164 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 NAE1Q13564 534 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 RUNX2Q13950 521 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 TMEM249Q2WGJ8 235 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms