RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 FAM20CQ8IXL6 584 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 TTC29Q8NA56 475 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 ZNF420Q8TAQ5 688 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 TMEM19Q96HH6 336 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 ZFYVE21Q9BQ24 234 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 GPR174Q9BXC1 333 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 SOX17Q9H6I2 414 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 LYRM4Q9HD34 91 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 ZCCHC3Q9NUD5 404 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 CALML5Q9NZT1 146 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 RSL24D1Q9UHA3 163 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 FBXW2Q9UKT8 454 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 PNMA8BQ9ULN7 279 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 NDRG4Q9ULP0 352 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 DUSP12Q9UNI6 340 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 TPRKBQ9Y3C4 175 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 PCDHGA8Q9Y5G5 932 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 LYVE1Q9Y5Y7 322 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 CEPT1Q9Y6K0 416 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 SPACA6W5XKT8 324 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 SNRNP200O75643 2136 aaKnown RBP13.96□□□□□ -0.17
ECHDC1-220ENST00000528402 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 A0A0G2JN53 185 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 A0A0J9YY10 115 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 GSAPA4D1B5 854 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 HMGN4O00479 90 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 B3GALT2O43825 422 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ABCB7O75027 752 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ERAL1O75616 437 aaKnown RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 SLITRK5O94991 958 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 MFN2O95140 757 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 AGR2O95994 175 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 IFI6P09912 130 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 NR2F6P10588 404 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ETS2P15036 469 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 POLR2CP19387 275 aaPredicted RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 CD72P21854 359 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 EEF1B2P24534 225 aaKnown RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 CRISP3P54108 245 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 CD47Q08722 323 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 PPP1R8Q12972 351 aaKnown RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 NPRL3Q12980 569 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 TP53BP2Q13625 1128 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 FZD2Q14332 565 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 TNFAIP8L2Q6P589 184 aaPredicted RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 KLHL35Q6PF15 583 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ISLR2Q6UXK2 745 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 PARGQ86W56 976 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 OOSP2Q86WS3 158 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 SLC22A18ASQ8N1D0 253 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ZNF687Q8N1G0 1237 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 SDR16C5Q8N3Y7 309 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 CHDHQ8NE62 594 aaPredicted RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 FLCNQ8NFG4 579 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 OR4C15Q8NGM1 316 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 BAHD1Q8TBE0 780 aaPredicted RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 NR4A3Q92570 626 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 PITX2Q99697 317 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 BTBD2Q9BX70 525 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 NPLQ9BXD5 320 aaPredicted RBP13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 GABARAPL3Q9BY60 117 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ADNPQ9H2P0 1102 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 LIPT1Q9Y234 373 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 POFUT2Q9Y2G5 429 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 GMPPBQ9Y5P6 360 aa13.96□□□□□ -0.18
ECHDC1-220ENST00000528402 ARHGEF17Q96PE2 2063 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 A0A0G2JPF8 293 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 A0A1B0GTW7 788 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 EME2A4GXA9 379 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 DUXAA6NLW8 204 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 HNRNPCL2B2RXH8 293 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 HNRNPCL3B7ZW38 293 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 E9PQ18 207 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 PGRMC2O15173 223 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 PPM1DO15297 605 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 OR6B1O95007 311 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 DIRAS1O95057 198 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 OPN1SWP03999 348 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 BCHEP06276 602 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 HNRNPCL4P0DMR1 293 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 NR2F1P10589 423 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 MAGP20916 626 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 CD27P26842 260 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 CERS1P27544 350 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 PIGAP37287 484 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 KCNJ5P48544 419 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 CASP9P55211 416 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 CDH15P55291 814 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 RAB8AP61006 207 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 SPIBQ01892 262 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 CDK5R2Q13319 367 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 PUS10Q3MIT2 529 aaKnown RBP13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 FCRL6Q6DN72 434 aa13.95□□□□□ -0.18
ECHDC1-220ENST00000528402 ARMC6Q6NXE6 501 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms