RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TBL3Q12788 808 aaKnown RBP12.47□□□□□ -0.41
CAPN1-215ENST00000528396 OR1C1Q15619 314 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 INAQ16352 499 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 ZNF766Q5HY98 468 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 LRIG3Q6UXM1 1119 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-215ENST00000528396 TMEM178AQ8NBL3 297 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 APCDD1LQ8NCL9 501 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 GALNT11Q8NCW6 608 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 OR4K14Q8NGD5 310 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 SLC2A12Q8TD20 617 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 RIT1Q92963 219 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 ZBTB9Q96C00 473 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 C19orf60Q96EN9 201 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 ZIM3Q96PE6 472 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 GATA5Q9BWX5 397 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-215ENST00000528396 KCNK9Q9NPC2 374 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 PFDN4Q9NQP4 134 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 KLHL1Q9NR64 748 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 ASF1BQ9NVP2 202 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 LRFN1Q9P244 771 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 MCM8Q9UJA3 840 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
CAPN1-215ENST00000528396 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 CLDN16Q9Y5I7 305 aa12.47□□□□□ -0.41
CAPN1-215ENST00000528396 C1orf226A1L170 272 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 AZIN1O14977 448 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 PGRMC2O15173 223 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 MAN1A2O60476 641 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 ERAL1O75616 437 aaKnown RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 RASAL1O95294 804 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 SLC35E2P0CK97 266 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 CHN1P15882 459 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 SERPINB3P29508 390 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 CD96P40200 585 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 ST13P50502 369 aaKnown RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 SSR4P51571 173 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 XKP51811 444 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 TRA2BP62995 288 aaKnown RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 IGLV3-21P80748 117 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 ZNF267Q14586 743 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 SPINK14Q6IE38 97 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 BCORP1Q8N888 145 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 FAM98AQ8NCA5 519 aaKnown RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 CDC26Q8NHZ8 85 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 CHTF18Q8WVB6 975 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 KLHL29Q96CT2 875 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 SENP5Q96HI0 755 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-215ENST00000528396 NPAS2Q99743 824 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 MECRQ9BV79 373 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 ERVK-11Q9UQG0 969 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 ZNF780BQ9Y6R6 833 aa12.46□□□□□ -0.41
CAPN1-215ENST00000528396 UNC79Q9P2D8 2635 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 CPAMD8Q8IZJ3 1885 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 WASHC1A8K0Z3 465 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 RGS14O43566 566 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 NPHS1O60500 1241 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 ITGA10O75578 1167 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 SLC25A12O75746 678 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 OR2J2O76002 312 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 DDAH2O95865 285 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 CRYABP02511 175 aaKnown RBP12.45□□□□□ -0.42
CAPN1-215ENST00000528396 ANXA4P09525 319 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-215ENST00000528396 CREB1P16220 341 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 PORP16435 677 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-215ENST00000528396 TIA1P31483 386 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN1-215ENST00000528396 SERPINB5P36952 375 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 HLCSP50747 726 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 FOXA1P55317 472 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 ERVK-8P63133 956 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 NR6A1Q15406 480 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 MAPKAPK3Q16644 382 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 FAM219BQ5XKK7 198 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 CLEC6AQ6EIG7 209 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 RPUSD3Q6P087 351 aaKnown RBP12.45□□□□□ -0.42
CAPN1-215ENST00000528396 SLC48A1Q6P1K1 146 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 RNF111Q6ZNA4 994 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 SLC29A4Q7RTT9 530 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 GALNT12Q8IXK2 581 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 DDIASQ8IXT1 998 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 GRHL3Q8TE85 626 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 ASB15Q8WXK1 588 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 TM4SF18Q96CE8 201 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 FBXL20Q96IG2 436 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 EBPLQ9BY08 206 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 GIMAP4Q9NUV9 329 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 OLAHQ9NV23 265 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 ERVK-19Q9WJR5 959 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 YARS2Q9Y2Z4 477 aaKnown RBP12.45□□□□□ -0.42
CAPN1-215ENST00000528396 PCDHA9Q9Y5H5 950 aa12.45□□□□□ -0.42
CAPN1-215ENST00000528396 SERTM1A2A2V5 107 aa12.44□□□□□ -0.42
CAPN1-215ENST00000528396 A8MVJ9 347 aa12.44□□□□□ -0.42
CAPN1-215ENST00000528396 TCP11X1B4DZS4 312 aa12.44□□□□□ -0.42
CAPN1-215ENST00000528396 WWP2O00308 870 aa12.44□□□□□ -0.42
CAPN1-215ENST00000528396 SLC28A1O00337 649 aa12.44□□□□□ -0.42
CAPN1-215ENST00000528396 TYROBPO43914 113 aa12.44□□□□□ -0.42
CAPN1-215ENST00000528396 SEC22BO75396 215 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms