RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ROGDIQ9GZN7 287 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 CAMK2AQ9UQM7 478 aa11.27□□□□□ -0.61
SRPRA-202ENST00000527817 EIF3LQ9Y262 564 aaKnown RBP11.27□□□□□ -0.61
SRPRA-202ENST00000527817 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 TRAPPC6AO75865 159 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 ACSL3O95573 720 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 COX7A2P14406 83 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 RPL21P46778 160 aaKnown RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 STT3AP46977 705 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 CDK9P50750 372 aaKnown RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF75DP51815 510 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 PGGT1BP53609 377 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 IGLV3-21P80748 117 aaPredicted RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 NTRK2Q16620 822 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 VN1R5Q7Z5H4 357 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 YTHDF3Q7Z739 585 aaKnown RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 VWA5B2Q8N398 1253 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 SRFBP1Q8NEF9 429 aaKnown RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 OR10G3Q8NGC4 313 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 ZPLD1Q8TCW7 415 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 RBM18Q96H35 190 aaKnown RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 ART5Q96L15 291 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 MAPKAP1Q9BPZ7 522 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 DOHHQ9BU89 302 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 UBQLN3Q9H347 655 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 EHD1Q9H4M9 534 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 COPS7BQ9H9Q2 264 aaPredicted RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 TRPS1Q9UHF7 1281 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF490Q9ULM2 529 aaPredicted RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 CORO1CQ9ULV4 474 aaPredicted RBP11.26□□□□□ -0.61
SRPRA-202ENST00000527817 GUCA1BQ9UMX6 200 aa11.26□□□□□ -0.61
SRPRA-202ENST00000527817 ROS1P08922 2347 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 DYRK3O43781 588 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 ERN1O75460 977 aaKnown RBP11.25□□□□□ -0.61
SRPRA-202ENST00000527817 SNX4O95219 450 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 TTC4O95801 387 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
SRPRA-202ENST00000527817 BMP7P18075 431 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 PGAM1P18669 254 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 GDF5P43026 501 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 MSH2P43246 934 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 SLC6A12P48065 614 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 KCNC1P48547 511 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 ID2Q02363 134 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 CRYMQ14894 314 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 FAM45BPQ6NSW5 357 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 UBE3DQ7Z6J8 389 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 FAM45AQ8TCE6 357 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 ABTB1Q969K4 478 aaPredicted RBP11.25□□□□□ -0.61
SRPRA-202ENST00000527817 FBXL20Q96IG2 436 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF597Q96LX8 424 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 ZFP3Q96NJ6 502 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 DGAT2Q96PD7 388 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 KCNC2Q96PR1 638 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 F2RL3Q96RI0 385 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 TBCDQ9BTW9 1192 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 SFXN3Q9BWM7 321 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 UGT2B28Q9BY64 529 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 GPRC5BQ9NZH0 403 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 FETUBQ9UGM5 382 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 SLC6A5Q9Y345 797 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 OARD1Q9Y530 152 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 SPACA6W5XKT8 324 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 MED12Q93074 2177 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 DSCAMO60469 2012 aa11.25□□□□□ -0.61
SRPRA-202ENST00000527817 HRKO00198 91 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 CDC7O00311 574 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 TP53I11O14683 189 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 CRLF1O75462 422 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 WDR47O94967 919 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 RCBTB2O95199 551 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 FPR1P21462 350 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 ATP5A1P25705 553 aaKnown RBP11.24□□□□□ -0.61
SRPRA-202ENST00000527817 PCYT1AP49585 367 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 FOXF2Q12947 444 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 RCAN2Q14206 197 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 ACKR1Q16570 336 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 FNDC7Q5VTL7 733 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF793Q6ZN11 406 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 SLC29A4Q7RTT9 530 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 NKAPQ8N5F7 415 aaKnown RBP11.24□□□□□ -0.61
SRPRA-202ENST00000527817 ACOT4Q8N9L9 421 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 C9orf106Q8NAJ2 232 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 BBOF1Q8ND07 529 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 DIO2Q92813 273 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 PPWD1Q96BP3 646 aaKnown RBP11.24□□□□□ -0.61
SRPRA-202ENST00000527817 RHBDF1Q96CC6 855 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 GNRHR2Q96P88 292 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 UCN2Q96RP3 112 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 SECISBP2Q96T21 854 aaKnown RBP11.24□□□□□ -0.61
SRPRA-202ENST00000527817 EGFL8Q99944 293 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 ANGPTL4Q9BY76 406 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 GALNT8Q9NY28 637 aa11.24□□□□□ -0.61
SRPRA-202ENST00000527817 NPFFR2Q9Y5X5 522 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms