RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SLC35C2Q9NQQ7 365 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 FBXL12Q9NXK8 326 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 CNOT2Q9NZN8 540 aaKnown RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 ACAD8Q9UKU7 415 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 MGAT4BQ9UQ53 548 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 ERGIC3Q9Y282 383 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 HEBP2Q9Y5Z4 205 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 TICRRQ7Z2Z1 1910 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 ATG2BQ96BY7 2078 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 A0A1W2PQU0 124 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 FAAHO00519 579 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 MAN2B1O00754 1011 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 GASTP01350 101 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 SERPIND1P05546 499 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 PPP2R1BP30154 601 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 UGT2B10P36537 528 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 TP53BP2Q13625 1128 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 FRMPD2BQ6IN97 320 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 BHLHB9Q6PI77 547 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 ZNF793Q6ZN11 406 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 KRT73Q86Y46 540 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 PLD3Q8IV08 490 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 SFXN5Q8TD22 340 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 CHPT1Q8WUD6 406 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 RAB8BQ92930 207 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 ABTB1Q969K4 478 aaPredicted RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 GTPBP3Q969Y2 492 aaKnown RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 AICDAQ9GZX7 198 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 GLIPR2Q9H4G4 154 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 XKR8Q9H6D3 395 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 SEC14L3Q9UDX4 400 aa14.54□□□□□ -0.08
USH1C-207ENST00000527720 YBX2Q9Y2T7 364 aaKnown RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 GPC6Q9Y625 555 aaPredicted RBP14.54□□□□□ -0.08
USH1C-207ENST00000527720 ANHXE9PGG2 379 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 SLC28A2O43868 658 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 NADKO95544 446 aaPredicted RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 C21orf33P30042 268 aaPredicted RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 IGFALSP35858 605 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 BCL6P41182 706 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 DCST1Q5T197 706 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 TCTN3Q6NUS6 607 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 ADCK1Q86TW2 530 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 ZBTB46Q86UZ6 589 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 SLC44A2Q8IWA5 706 aaPredicted RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 STX19Q8N4C7 294 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 AMER3Q8N944 861 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 SRFBP1Q8NEF9 429 aaKnown RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 KLK6Q92876 244 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 MOAP1Q96BY2 351 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 MS4A6EQ96DS6 147 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 MYADMQ96S97 322 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 APOOQ9BUR5 198 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 SEMA3GQ9NS98 782 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 EFCAB10A6NFE3 127 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 EFCAB9A8MZ26 197 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 J3QRK9 145 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 K7EQS6 105 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 RNGTTO60942 597 aaKnown RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 SULT1C4O75897 302 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 H1F0P07305 194 aaKnown RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 POU2F1P14859 743 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 CHMP24386 653 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 ELAVL4P26378 380 aaKnown RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 GPC1P35052 558 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 KHKP50053 298 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 OLR1P78380 273 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 HYAL2Q12891 473 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 GNA13Q14344 377 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 IRF3Q14653 427 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 TIGD6Q17RP2 521 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 MRM1Q6IN84 353 aaKnown RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 DCDC5Q6ZRR9 648 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 IGFN1Q86VF2 1251 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 TMCO5AQ8N6Q1 288 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 FAM46DQ8NEK8 389 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 OR2L3Q8NG85 312 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 OR14C36Q8NHC7 312 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 BBS10Q8TAM1 723 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 GANCQ8TET4 914 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 TREX2Q9BQ50 279 aaPredicted RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 SPATA5L1Q9BVQ7 753 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 TRMT61BQ9BVS5 477 aaKnown RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 OR51I1Q9H343 314 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 SERHL2Q9H4I8 314 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 IGFLR1Q9H665 355 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 KIR3DX1Q9H7L2 352 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 BCL2L10Q9HD36 194 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 SLC6A20Q9NP91 592 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 RHCGQ9UBD6 479 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 NDOR1Q9UHB4 597 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 OSGIN1Q9UJX0 560 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 PNMA8BQ9ULN7 279 aaPredicted RBP14.53□□□□□ -0.08
USH1C-207ENST00000527720 GPSM3Q9Y4H4 160 aa14.53□□□□□ -0.08
USH1C-207ENST00000527720 PDZK1P1A8MUH7 402 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 M0R082 166 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 MAGEB3O15480 346 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 LATO43561 262 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 DNTTP04053 509 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 OSMP13725 252 aa14.52□□□□□ -0.08
USH1C-207ENST00000527720 HIST1H1TP22492 207 aaPredicted RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms