RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 LMNTD1Q8N9Z9 388 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 TRMT61AQ96FX7 289 aaKnown RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 LYSMD1Q96S90 227 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 STUB1Q9UNE7 303 aa11.91□□□□□ -0.5
CAPN1-208ENST00000527323 EXO1Q9UQ84 846 aaKnown RBP11.91□□□□□ -0.5
CAPN1-208ENST00000527323 IGLV3-16A0A075B6K0 115 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 A0A1W2PRB8 838 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 LEFTY2O00292 366 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 SCO2O43819 266 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 TNNI3P19429 210 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 IGFBP4P22692 258 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 CRYBB2P43320 205 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 GSTM5P46439 218 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 TAS2R50P59544 299 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 HNRNPA0Q13151 305 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 LARS2Q15031 903 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 COMMD6Q7Z4G1 85 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 LILRA3Q8N6C8 439 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 SMG7Q92540 1137 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 C11orf24Q96F05 449 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 SAMD11Q96NU1 681 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 MND1Q9BWT6 205 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 TSSK6Q9BXA6 273 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 FAM83DQ9H4H8 585 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 LSM7Q9UK45 103 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 RPL36Q9Y3U8 105 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 SNX11Q9Y5W9 270 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 A0A1W2PQL4 384 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 A8MVJ9 347 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF670-ZNF695F2Z2N8 137 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 CLEC2LP0C7M8 214 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 MYL9P24844 172 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 SSTR4P31391 388 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 HMGA2P52926 109 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 GDPGP1Q6ZNW5 385 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 CAMKMTQ7Z624 323 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 ENKURQ8TC29 256 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 NEIL2Q969S2 332 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 WRAP53Q9BUR4 548 aaKnown RBP11.9□□□□□ -0.5
CAPN1-208ENST00000527323 TVP23BQ9NYZ1 205 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 STOML2Q9UJZ1 356 aa11.9□□□□□ -0.5
CAPN1-208ENST00000527323 FAM25AB3EWG3 89 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 FAM25CB3EWG5 89 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 FAM25GB3EWG6 89 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 PLD2O14939 933 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 GPR37L1O60883 481 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 KLK1P06870 262 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 SRCP12931 536 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 XKP51811 444 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 NCF4Q15080 339 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 CRB2Q5IJ48 1285 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 RPS26P11Q5JNZ5 115 aaPredicted RBP11.9□□□□□ -0.51
CAPN1-208ENST00000527323 DCST1Q5T197 706 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 C22orf42Q6IC83 251 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 TNFAIP8L2Q6P589 184 aaPredicted RBP11.9□□□□□ -0.51
CAPN1-208ENST00000527323 DEF8Q6ZN54 512 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 DPY19L3Q6ZPD9 716 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 Q6ZVL8 140 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 OR7G1Q8NGA0 311 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 WDR48Q8TAF3 677 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 SLC7A6Q92536 515 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 METTL2AQ96IZ6 378 aaKnown RBP11.9□□□□□ -0.51
CAPN1-208ENST00000527323 FRMD6Q96NE9 622 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 C11orf54Q9H0W9 315 aaPredicted RBP11.9□□□□□ -0.51
CAPN1-208ENST00000527323 POLR2J3Q9H1A7 115 aaKnown RBP11.9□□□□□ -0.51
CAPN1-208ENST00000527323 ATP6V1HQ9UI12 483 aa11.9□□□□□ -0.51
CAPN1-208ENST00000527323 OTOL1A6NHN0 477 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 OR6C70A6NIJ9 312 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 TSPAN6O43657 245 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 GSTM1P09488 218 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 OSMP13725 252 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 DSTNP60981 165 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 RPS26P62854 115 aaKnown RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 MEF2AQ02078 507 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 NUMA1Q14980 2115 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 FAM214AQ32MH5 1076 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 GPAT3Q53EU6 434 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 CELF5Q8N6W0 485 aaKnown RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 CYB5D2Q8WUJ1 264 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 C1GALT1C1Q96EU7 318 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 FOPNLQ96NB1 174 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 TMEM38AQ9H6F2 299 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 GULP1Q9UBP9 304 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 NINQ8N4C6 2090 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 ANKDD1BA6NHY2 528 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 TLX2O43763 284 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 MOSPD3O75425 235 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 HBQ1P09105 142 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 PRKCAP17252 672 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 POLR2EP19388 210 aaKnown RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 RPS5P46782 204 aaKnown RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 ZNF91Q05481 1191 aa11.89□□□□□ -0.51
CAPN1-208ENST00000527323 ELOAQ14241 798 aaKnown RBP11.89□□□□□ -0.51
CAPN1-208ENST00000527323 SLBPQ14493 270 aaKnown RBP eCLIP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms