RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PLPP1O14494 284 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF195O14628 629 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 KLF11O14901 512 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 JUNP05412 331 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 SERPIND1P05546 499 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ENO1P06733 434 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 PCNAP12004 261 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ALOX12P18054 663 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 IL1RNP18510 177 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ALAS2P22557 587 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 MSX1P28360 303 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ADSLP30566 484 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 BSGP35613 385 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 SERPINB5P36952 375 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ABCE1P61221 599 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 MAT1AQ00266 395 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 OCRLQ01968 901 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 KIAA0040Q15053 153 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 MUM1Q2TAK8 710 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 SGO1Q5FBB7 561 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 KHDRBS2Q5VWX1 349 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 RNF165Q6ZSG1 346 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 NCCRP1Q6ZVX7 275 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 TRIM46Q7Z4K8 759 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 LAPTM4BQ86VI4 370 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 MYLK4Q86YV6 388 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 METTL27Q8N6F8 245 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF781Q8N8C0 355 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 TTLQ8NG68 377 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 OR2L5Q8NG80 312 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 OR5T3Q8NGG3 340 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 OR2T11Q8NH01 316 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ZCCHC10Q8TBK6 192 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 PSMF1Q92530 271 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 N4BP2L2Q92802 583 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 UBE2E3Q969T4 207 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 C3orf30Q96M34 536 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 GPR137Q96N19 417 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 PAIP2Q9BPZ3 127 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ACPTQ9BZG2 426 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 MANSC1Q9H8J5 431 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 PNPOQ9NVS9 261 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ADGRE2Q9UHX3 823 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 NXT1Q9UKK6 140 aaKnown RBP10.21□□□□□ -0.77
NEDD8-204ENST00000526430 NAALAD2Q9Y3Q0 740 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 TRAF6Q9Y4K3 522 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 CLDN16Q9Y5I7 305 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 MAU2Q9Y6X3 613 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 NPIPB8E9PQR5 432 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SGK494L7N484 410 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SAP18O00422 153 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 ADAM10O14672 748 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 AZIN1O14977 448 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SCELO95171 688 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 NSA2O95478 260 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 HOXD4P09016 255 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SLC35G6P0C7Q6 338 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 UROSP10746 265 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 DNASE1P24855 282 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 GRK2P25098 689 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 PTX3P26022 381 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SLC1A6P48664 564 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 OLR1P78380 273 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 RAE1P78406 368 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 ASPHQ12797 758 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 STX3Q13277 289 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CUL3Q13618 768 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 DDX39BQ13838 428 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 NKG7Q16617 165 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 DEFB134Q4QY38 66 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CFAP157Q5JU67 520 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 MRM1Q6IN84 353 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 OVCH1Q7RTY7 1134 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CAMKMTQ7Z624 323 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 KBTBD2Q8IY47 623 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CLYBLQ8N0X4 340 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 AMER2Q8N7J2 671 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 TTC29Q8NA56 475 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SUN3Q8TAQ9 357 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CKAP2Q8WWK9 683 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 SELENOMQ8WWX9 145 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 UCN3Q969E3 161 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 GAL3ST3Q96A11 431 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 MVB12AQ96EY5 273 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CMTM7Q96FZ5 175 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 MESP1Q9BRJ9 268 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 REXO4Q9GZR2 422 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 ZNF304Q9HCX3 659 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 MED4Q9NPJ6 270 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 DNAJB12Q9NXW2 375 aaKnown RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 NKIRAS1Q9NYS0 192 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 PLA2G3Q9NZ20 509 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 STK38LQ9Y2H1 464 aa10.2□□□□□ -0.78
NEDD8-204ENST00000526430 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-204ENST00000526430 OR2W5A6NFC9 320 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 ZNF860A6NHJ4 632 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 WASHC1A8K0Z3 465 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 FAM227AF5H4B4 570 aa10.19□□□□□ -0.78
NEDD8-204ENST00000526430 H0YIG0 161 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms