RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 VAMP7P51809 220 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 DLK1P80370 383 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 PAX8Q06710 450 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 RIGQ13278 110 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 PSMD6Q15008 389 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 EXT1Q16394 746 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 CDC37Q16543 378 aaPredicted RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 CELF3Q5SZQ8 465 aaKnown RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 IL17RELQ6ZVW7 336 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 UBALD2Q8IYN6 164 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 CCAR2Q8N163 923 aaKnown RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 IQUBQ8NA54 791 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 COLGALT1Q8NBJ5 622 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 NUP37Q8NFH4 326 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 PPTC7Q8NI37 304 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 PIBF1Q8WXW3 757 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 PROX1Q92786 737 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 NKX3-1Q99801 234 aaPredicted RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 RAB11FIP5Q9BXF6 653 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 TRIM6Q9C030 488 aaPredicted RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 NAPBQ9H115 298 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 SETXQ7Z333 2677 aaKnown RBP4.39□□□□□ -1.71
COPB1-204ENST00000526191 ZFYVE26Q68DK2 2539 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 LAMA4Q16363 1823 aa4.39□□□□□ -1.71
COPB1-204ENST00000526191 ANKRD11Q6UB99 2663 aaPredicted RBP4.38□□□□□ -1.71
COPB1-204ENST00000526191 SNURFLB1AK76 121 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 ATP6AP2O75787 350 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 GSRP00390 522 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 PDHBP11177 359 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 XGP55808 180 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 TMEM50BP56557 158 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 HAND2P61296 217 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 TSPY1Q01534 308 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 MGAT3Q09327 533 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 EFTUD2Q15029 972 aaKnown RBP eCLIP4.38□□□□□ -1.71
COPB1-204ENST00000526191 TRAT1Q6PIZ9 186 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 NDUFAF2Q8N183 169 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 RYBPQ8N488 228 aaPredicted RBP4.38□□□□□ -1.71
COPB1-204ENST00000526191 KLHDC1Q8N7A1 406 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 SUMF1Q8NBK3 374 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 OR2L2Q8NH16 312 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 P2RX5Q93086 422 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 SIPA1Q96FS4 1042 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 KATNB1Q9BVA0 655 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 ZMYND12Q9H0C1 365 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 FN3KQ9H479 309 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 MED20Q9H944 212 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 CHST11Q9NPF2 352 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 PXMP2Q9NR77 195 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 CHCHD3Q9NX63 227 aaKnown RBP4.38□□□□□ -1.71
COPB1-204ENST00000526191 TXNDC16Q9P2K2 825 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 C19orf25Q9UFG5 118 aaPredicted RBP4.38□□□□□ -1.71
COPB1-204ENST00000526191 CCDC171Q6TFL3 1326 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 ADAMTS9Q9P2N4 1935 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 PLIN4Q96Q06 1357 aa4.38□□□□□ -1.71
COPB1-204ENST00000526191 CNOT1A5YKK6 2376 aaKnown RBP4.38□□□□□ -1.71
COPB1-204ENST00000526191 ANXA2P2A6NMY6 339 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 RNF113AO15541 343 aaKnown RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 KINO60870 393 aaKnown RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 HSPA4LO95757 839 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 SCG2P13521 617 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 GLULP15104 373 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 AZU1P20160 251 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 CDC25CP30307 473 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 CSTF1Q05048 431 aaKnown RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 FAM133BQ5BKY9 247 aaKnown RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 C6orf136Q5SQH8 315 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 CES4AQ5XG92 561 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 OR4A47Q6IF82 309 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 ZSCAN25Q6NSZ9 544 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 ADCK2Q7Z695 626 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 ABI3BPQ7Z7G0 1075 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 SLC37A3Q8NCC5 494 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 KCNE4Q8WWG9 221 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 RASL10AQ92737 203 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 C4orf45Q96LM5 186 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 ZMAT2Q96NC0 199 aaKnown RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 AGAP4Q96P64 663 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 RAB3IPQ96QF0 476 aaPredicted RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 SPAG5Q96R06 1193 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 XAB2Q9HCS7 855 aaKnown RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 MTF2Q9Y483 593 aaPredicted RBP4.37□□□□□ -1.71
COPB1-204ENST00000526191 WDFY3Q8IZQ1 3526 aa4.37□□□□□ -1.71
COPB1-204ENST00000526191 TICRRQ7Z2Z1 1910 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 CROCCQ5TZA2 2017 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 ATG2BQ96BY7 2078 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 SPEGQ15772 3267 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 A0A087WV48 116 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 TRAV24A0A0B4J272 114 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 N4BP1O75113 896 aaKnown RBP4.36□□□□□ -1.71
COPB1-204ENST00000526191 CXCL14O95715 111 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 IGHV3-13P01766 116 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 STAG3L1P0CL83 205 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 HSPD1P10809 573 aaKnown RBP4.36□□□□□ -1.71
COPB1-204ENST00000526191 TOP1P11387 765 aaKnown RBP4.36□□□□□ -1.71
COPB1-204ENST00000526191 GP1BBP13224 206 aa4.36□□□□□ -1.71
COPB1-204ENST00000526191 ACAT1P24752 427 aaKnown RBP4.36□□□□□ -1.71
COPB1-204ENST00000526191 HLA-FP30511 346 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms