RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ITGB1BP1O14713 200 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 KCNN4O15554 427 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 GPAA1O43292 621 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 BUD23O43709 281 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 SCO2O43819 266 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SCN2BO60939 215 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 BAG4O95429 457 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 ZBTB11O95625 1053 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 BAG3O95817 575 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PNMA6AP0CW24 399 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 HRH2P25021 359 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ITPKBP27987 946 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PTGER4P35408 488 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SLC7A2P52569 658 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 RAD23BP54727 409 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 POLR2GP62487 172 aaKnown RBP eCLIP4.17□□□□□ -1.74
CD44-213ENST00000525209 E2F1Q01094 437 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PAX5Q02548 391 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 MBTD1Q05BQ5 628 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SULT2A1Q06520 285 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SLC3A1Q07837 685 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 IL10RBQ08334 325 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 BST2Q10589 180 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 TROAPQ12815 778 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ILF2Q12905 390 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 IKZF1Q13422 519 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 R3HDM1Q15032 1099 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 RBBP7Q16576 425 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ZSWIM7Q19AV6 140 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 C18orf21Q32NC0 220 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 LSM12Q3MHD2 195 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 UGT3A2Q3SY77 523 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SYTL3Q4VX76 610 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SBK1Q52WX2 424 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 TMEM31Q5JXX7 168 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 CDKL4Q5MAI5 379 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 LIPNQ5VXI9 398 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 LIPKQ5VXJ0 399 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 CAPN13Q6MZZ7 669 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 OGFOD2Q6N063 350 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 RHBDD2Q6NTF9 364 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 CEP85Q6P2H3 762 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 TMPRSS11FQ6ZWK6 438 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 USP50Q70EL3 339 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 G2E3Q7L622 706 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 NLRP9Q7RTR0 991 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ANKRD33Q7Z3H0 272 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 RD3Q7Z3Z2 195 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SNX20Q7Z614 316 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SYT12Q8IV01 421 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 CNGA4Q8IV77 575 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 TMEM123Q8N131 208 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 NAGSQ8N159 534 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 GABRG1Q8N1C3 465 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 FBXL16Q8N461 479 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PAQR4Q8N4S7 273 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 ZNF276Q8N554 614 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 FANK1Q8TC84 345 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 XAGE5Q8WWM1 108 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SEMA4DQ92854 862 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 RPL3LQ92901 407 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 GLYATL1Q969I3 302 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ADIPOR1Q96A54 375 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ZG16BQ96DA0 208 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 RAB39BQ96DA2 213 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PTCD3Q96EY7 689 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 PPP1R16AQ96I34 528 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 HPDLQ96IR7 371 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PLEKHA8Q96JA3 519 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 LCORQ96JN0 433 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 ZNF514Q96K75 400 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 ZNF512Q96ME7 567 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 VSTM2LQ96N03 204 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ZNF582Q96NG8 517 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 ZNF570Q96NI8 536 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 TSSK2Q96PF2 358 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PRMT1Q99873 361 aaKnown RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 CPPED1Q9BRF8 314 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 CNPY3Q9BT09 278 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 C11orf84Q9BUA3 381 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 HINT2Q9BX68 163 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 NLNQ9BYT8 704 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 TPSD1Q9BZJ3 242 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 TM6SF2Q9BZW4 377 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 OPN3Q9H1Y3 402 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 OR2AG1Q9H205 316 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 GOLPH3Q9H4A6 298 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 Q9N2K0 584 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 DMAP1Q9NPF5 467 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 ACSS1Q9NUB1 689 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 UFSP2Q9NUQ7 469 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 POT1Q9NUX5 634 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 SMPD4Q9NXE4 827 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 MS4A12Q9NXJ0 267 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 LCMT1Q9UIC8 334 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 ACSL5Q9ULC5 683 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 PSMD13Q9UNM6 376 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 CSDC2Q9Y534 153 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms