RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 XKP51811 444 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 EFNA3P52797 238 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC18A1P54219 525 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FOXA1P55317 472 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 RPL38P63173 70 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 IGLV3-21P80748 117 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAD2L1Q13257 205 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF267Q14586 743 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF169Q14929 603 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 INAQ16352 499 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 GALNTL6Q49A17 601 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 NADK2Q4G0N4 442 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 HSP90B2PQ58FF3 399 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 HLA-DQA1Q5Y7H0 255 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FCRLBQ6BAA4 426 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC48A1Q6P1K1 146 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 GALNT18Q6P9A2 607 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM180AQ6UWF9 173 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 IGFL2Q6UWQ7 119 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 RNF111Q6ZNA4 994 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATCAYQ86WG3 371 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 RPS19BP1Q86WX3 136 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CRLF3Q8IUI8 442 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR4N5Q8IXE1 308 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 GALNT12Q8IXK2 581 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 GPALPP1Q8IXQ4 340 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM9CQ8IZT9 166 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 BEST3Q8N1M1 668 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 LRRC25Q8N386 305 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 KIF2BQ8N4N8 673 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM156Q8N614 296 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM178AQ8NBL3 297 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM98AQ8NCA5 519 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR1N1Q8NGS0 311 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZFP28Q8NHY6 868 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC22A8Q8TCC7 542 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC2A12Q8TD20 617 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ELP5Q8TE02 316 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 C16orf78Q8WTQ4 265 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ASB15Q8WXK1 588 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ANKRD9Q96BM1 317 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 TLCD1Q96CP7 247 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 TUBGCP3Q96CW5 907 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 C19orf60Q96EN9 201 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 APIPQ96GX9 242 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 FBXL20Q96IG2 436 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 BBS4Q96RK4 519 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CDCP1Q9H5V8 836 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 MYNNQ9NPC7 610 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 AGPAT4Q9NRZ5 378 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 RYDENQ9NUL5 291 aaKnown RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 SIRT5Q9NXA8 310 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 EHD3Q9NZN3 535 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 UTS2RQ9UKP6 389 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 ERVK-11Q9UQG0 969 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 CFL2Q9Y281 166 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 DLGAP4Q9Y2H0 992 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 RAP2CQ9Y3L5 183 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 POLR3HQ9Y535 204 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 PCDHA9Q9Y5H5 950 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 DNAJC15Q9Y5T4 150 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 PCM1Q15154 2024 aa5.04□□□□□ -1.6
HMGB1P40-201ENST00000525121 HEATR5BQ9P2D3 2071 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 MYOCOSA0A1B0GUC4 107 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRPC5OSA6NMA1 111 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 A8MVJ9 347 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 CAPN14A8MX76 684 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM233B4DJY2 109 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLCO1B7G3V0H7 640 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TGFBR3LH3BV60 316 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 J3QKU1 62 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 LSM1O15116 133 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PGRMC2O15173 223 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 SUV39H1O43463 412 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 BCAS2O75934 225 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 C1QL1O75973 258 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLITRK5O94991 958 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 WDPCPO95876 746 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATP1B1P05026 303 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 DHRS4L1P0CG22 281 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 DDCP20711 480 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRPH2P23942 346 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 MPIP34949 423 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 FEN1P39748 380 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 CYB561P49447 251 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 RPL14P50914 215 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 HK2P52789 917 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 NRG3P56975 720 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 MLF1P58340 268 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 ERVK-8P63133 956 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 RNF4P78317 190 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TLE1Q04724 770 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 C2orf80Q0P641 193 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 ELOAQ14241 798 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR1C1Q15619 314 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PDCD2Q16342 344 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms