RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 UNC5DQ6UXZ4 953 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 PLEKHM3Q6ZWE6 761 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF575Q86XF7 245 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 LDLRAD3Q86YD5 345 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 CCDC65Q8IXS2 484 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 GPR150Q8NGU9 434 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 SARAFQ96BY9 339 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 AP2M1Q96CW1 435 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 UTP23Q9BRU9 249 aaKnown RBP6.37□□□□□ -1.39
NEDD8-203ENST00000524927 CARD9Q9H257 536 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 PSD3Q9NYI0 1048 aa6.37□□□□□ -1.39
NEDD8-203ENST00000524927 VSTM2BA6NLU5 285 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 I6L893 689 aaPredicted RBP6.36□□□□□ -1.39
NEDD8-203ENST00000524927 M0QYV0 167 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 CASKO14936 926 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 CDC40O60508 579 aaKnown RBP eCLIP6.36□□□□□ -1.39
NEDD8-203ENST00000524927 ICAM2P13598 275 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 IGFBP5P24593 272 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 GGT5P36269 586 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 MVDP53602 400 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 DCDC1P59894 354 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 MESDQ14696 234 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 CMPK2Q5EBM0 449 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 C1orf220Q5T0J3 134 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 RTL6Q6ICC9 239 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 SPINK14Q6IE38 97 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 ADGRG6Q86SQ4 1221 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 DEFB106AQ8N104 65 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 BEST3Q8N1M1 668 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 AMER2Q8N7J2 671 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 SLCO2A1Q92959 643 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 RITA1Q96K30 269 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF354BQ96LW1 612 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 ADAD1Q96M93 576 aaKnown RBP6.36□□□□□ -1.39
NEDD8-203ENST00000524927 ABCG8Q9H221 673 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 PNPLA3Q9NST1 481 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 TMEM51Q9NW97 253 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 ARL15Q9NXU5 204 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 POMT2Q9UKY4 750 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 SNX10Q9Y5X0 201 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 SCN2AQ99250 2005 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 CMYA5Q8N3K9 4069 aa6.36□□□□□ -1.39
NEDD8-203ENST00000524927 A0A1W2PQ67 120 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 GPR89AB7ZAQ6 455 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 MCIDASD6RGH6 385 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 TRAFD1O14545 582 aaPredicted RBP6.35□□□□□ -1.39
NEDD8-203ENST00000524927 TSPAN4O14817 238 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 BCKDKO14874 412 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 PIN1P1O15428 100 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 NME2P1O60361 137 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 WDR1O75083 606 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 RNF8O76064 485 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CELA2AP08217 269 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 GPR89BP0CG08 455 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CYP2A6P11509 494 aaPredicted RBP6.35□□□□□ -1.39
NEDD8-203ENST00000524927 ABCD3P28288 659 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 TACR3P29371 465 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 LONP1P36776 959 aaKnown RBP6.35□□□□□ -1.39
NEDD8-203ENST00000524927 LMAN1P49257 510 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 BCL2L1Q07817 233 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 IHHQ14623 411 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CYTH1Q15438 398 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 RILPL1Q5EBL4 403 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 ACER2Q5QJU3 275 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 SH2D4BQ5SQS7 431 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 FAM69AQ5T7M9 428 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CYB5R2Q6BCY4 276 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 FIGLAQ6QHK4 219 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 DNM1P46Q6ZS02 220 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 SHISA6Q6ZSJ9 500 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CDHR3Q6ZTQ4 885 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 RNF144BQ7Z419 303 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 RFX6Q8HWS3 928 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 ARMC8Q8IUR7 673 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 GOLGA5Q8TBA6 731 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 DENND1AQ8TEH3 1009 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CREB3L4Q8TEY5 395 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 TMEM174Q8WUU8 243 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 N4BP2L2Q92802 583 aaPredicted RBP6.35□□□□□ -1.39
NEDD8-203ENST00000524927 C8orf44Q96CB5 159 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 CELF6Q96J87 481 aaKnown RBP6.35□□□□□ -1.39
NEDD8-203ENST00000524927 TNFRSF13CQ96RJ3 184 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 FUZQ9BT04 418 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 PITPNM3Q9BZ71 974 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 AASSQ9UDR5 926 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 PKP3Q9Y446 797 aa6.35□□□□□ -1.39
NEDD8-203ENST00000524927 RAI1Q7Z5J4 1906 aaPredicted RBP6.35□□□□□ -1.39
NEDD8-203ENST00000524927 IGHV1-45A0A0A0MS14 117 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 OR6C74A6NCV1 312 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 NPIPA2E9PIF3 369 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 NPIPA3F8WFD2 350 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 HSF2BPO75031 334 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 PAEPP09466 180 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 ST6GAL1P15907 406 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 BMP5P22003 454 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 UGT1A1P22309 533 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 LHCGRP22888 699 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 CASP2P42575 452 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 GPD2P43304 727 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 GCLMP48507 274 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms