RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 LOC110117498-PIK3R3F6TDL0 507 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 H0Y626 953 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CBX4O00257 560 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TBX1O43435 398 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 UGDHO60701 494 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SOCS5O75159 536 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TRIM16O95361 564 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PTHP01270 115 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 EPHX1P07099 455 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 C8GP07360 202 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SYPP08247 313 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ADRA2AP08913 450 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ACADMP11310 421 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 HSD3B1P14060 373 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 JUPP14923 745 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 GNSP15586 552 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ENDOUP21128 410 aaKnown RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PPIBP23284 216 aaKnown RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 HSD3B2P26439 372 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 RCVRNP35243 200 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SPAM1P38567 509 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 IL12RB1P42701 662 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TPMTP51580 245 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 MVDP53602 400 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 RHOAP61586 193 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 B4GALNT1Q00973 533 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ENPP2Q13822 863 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 E2F2Q14209 437 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ZNF234Q14588 700 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SF3B4Q15427 424 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CHRNA6Q15825 494 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SGO1Q5FBB7 561 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 WDR45BQ5MNZ6 344 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ATXN7L2Q5T6C5 722 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 AGAP6Q5VW22 663 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TMEM215Q68D42 235 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 NOXRED1Q6NXP6 359 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ZCCHC8Q6NZY4 707 aaKnown RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SERPINA13PQ6UXR4 307 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 LINGO4Q6UY18 593 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CCDC80Q76M96 950 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 GDPD3Q7L5L3 318 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 GALNT10Q86SR1 603 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 NLGN4XQ8N0W4 816 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PARP16Q8N5Y8 322 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 AMER2Q8N7J2 671 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 FAM181AQ8N9Y4 354 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 POC5Q8NA72 575 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 DENND6BQ8NEG7 585 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 IL17RDQ8NFM7 739 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CADM4Q8NFZ8 388 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 EDARADDQ8WWZ3 215 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PIK3R3Q92569 461 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PROX1Q92786 737 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 MYDGFQ969H8 173 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SIPA1Q96FS4 1042 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TOE1Q96GM8 510 aaKnown RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CRELD1Q96HD1 420 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 EGLN2Q96KS0 407 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 AGAP4Q96P64 663 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CCDC32Q9BV29 185 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TAPBPLQ9BX59 468 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SLC12A9Q9BXP2 914 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 MKRN2Q9H000 416 aaKnown RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 ASB8Q9H765 288 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 CAPN10Q9HC96 672 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 THSD1Q9NS62 852 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 QPCTLQ9NXS2 382 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 KIF17Q9P2E2 1029 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 FAM8A1Q9UBU6 413 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 VPS51Q9UID3 782 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PNMA8BQ9ULN7 279 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-223ENST00000524033 POFUT2Q9Y2G5 429 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PPIL1Q9Y3C6 166 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 TSC22D4Q9Y3Q8 395 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 GRIP1Q9Y3R0 1128 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 KLK4Q9Y5K2 254 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 PEX16Q9Y5Y5 336 aa7.45□□□□□ -1.22
SPIDR-223ENST00000524033 SPTBN2O15020 2390 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 GLYATL1P3A0A0U1RQE8 302 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ARRDC5A6NEK1 342 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 PRAMEF25A6NGN4 478 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 MAGEB17A8MXT2 336 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 UPK3BL1B0FP48 263 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 UPK3BL2E5RIL1 263 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 GFYI3L273 518 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 SCAMP2O15127 329 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ASNA1O43681 348 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 VIPP01282 170 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 C1SP09871 688 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 TRAPPC2P0DI81 140 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 TRAPPC2BP0DI82 140 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 PIPP12273 146 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 ANXA8P13928 327 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CD22P20273 847 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 CBLP22681 906 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 MAOBP27338 520 aa7.44□□□□□ -1.22
SPIDR-223ENST00000524033 GTF2E2P29084 291 aaKnown RBP7.44□□□□□ -1.22
SPIDR-223ENST00000524033 RRM2P31350 389 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms