RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 MMABQ96EY8 250 aaPredicted RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 RUFY1Q96T51 708 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 PKP2Q99959 881 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 OMDQ99983 421 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 VGLL1Q99990 258 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 RBM4BQ9BQ04 359 aaKnown RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 PSD2Q9BQI7 771 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 FEM1AQ9BSK4 669 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 TUBB2BQ9BVA1 445 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 STRA6Q9BX79 667 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 PAIP1Q9H074 479 aaKnown RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 TNMDQ9H2S6 317 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 UNC45AQ9H3U1 944 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 DHX33Q9H6R0 707 aaKnown RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 APOBEC3GQ9HC16 384 aaKnown RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 APMAPQ9HDC9 416 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 CCDC177Q9NQR7 707 aaPredicted RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 YAE1D1Q9NRH1 226 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 TBC1D22BQ9NU19 505 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 SLC38A7Q9NVC3 462 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 ELOVL2Q9NXB9 296 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 BARHL2Q9NY43 387 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 IL17CQ9P0M4 197 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 PDP2Q9P2J9 529 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 CYTH4Q9UIA0 394 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 NAALADL1Q9UQQ1 740 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 MRPS28Q9Y2Q9 187 aaKnown RBP3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 CLIC4Q9Y696 253 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 MAU2Q9Y6X3 613 aa3.28□□□□□ -1.88
NSMCE2-211ENST00000523549 IGHV5-10-1A0A0J9YXX1 117 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 NKX2-6A6NCS4 301 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ZNF840PA6NDX5 716 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 CLDN4O14493 209 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 PLXNB1O43157 2135 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 PAGE4O60829 102 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 SPARCP09486 303 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 PLA2G4BP0C869 781 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 GATA1P15976 413 aaPredicted RBP3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 GNAZP19086 355 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 TYMPP19971 482 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ABCD3P28288 659 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 PSMD8P48556 350 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 METAP1P53582 386 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 DCAF7P61962 342 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 DMPKQ09013 629 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 CDC16Q13042 620 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 RALBP1Q15311 655 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 CST6Q15828 149 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 KYNUQ16719 465 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 TPRG1LQ5T0D9 272 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ACAD10Q6JQN1 1059 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ALKAL1Q6UXT8 129 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 GCNT7Q6ZNI0 430 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 Q6ZS92 163 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 CPLX4Q7Z7G2 160 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 SLC47A2Q86VL8 602 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 MMAAQ8IVH4 418 aaKnown RBP3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 TMTC2Q8N394 836 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 GBGT1Q8N5D6 347 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ARL10Q8N8L6 244 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 BMPERQ8N8U9 685 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 C2orf15Q8WU43 125 aaKnown RBP3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 TCP11Q8WWU5 503 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ZUFSPQ96AP4 578 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ZNF414Q96IQ9 312 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 CEP170P1Q96L14 293 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 SMC6Q96SB8 1091 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ADPGKQ9BRR6 497 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 RSPH9Q9H1X1 276 aaPredicted RBP3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 ACTL8Q9H568 366 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 XPNPEP1Q9NQW7 623 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 OLAHQ9NV23 265 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 INTS10Q9NVR2 710 aaKnown RBP3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 STMN3Q9NZ72 180 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 WDR35Q9P2L0 1181 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 CLEC4EQ9ULY5 219 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 KCNJ14Q9UNX9 436 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 PYGO1Q9Y3Y4 419 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 TMEM184BQ9Y519 407 aaPredicted RBP3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 MED12Q93074 2177 aa3.27□□□□□ -1.89
NSMCE2-211ENST00000523549 PCM1Q15154 2024 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 YLPM1P49750 1951 aaKnown RBP3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 FAM237BA0A1B0GVD1 139 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 MEIOCA2RUB1 952 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 LMO7DNF2Z398 122 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 EPB41L2O43491 1005 aaKnown RBP3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 PTMAP06454 111 aaKnown RBP3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 LIPFP07098 398 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 CALM1P0DP23 149 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 CALM2P0DP24 149 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 CALM3P0DP25 149 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 ODC1P11926 461 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 GLRA2P23416 452 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 SLC12A3P55017 1021 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 TFDP1Q14186 410 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 C3AR1Q16581 482 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 ZNF805Q5CZA5 627 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 XKR4Q5GH76 650 aa3.26□□□□□ -1.89
NSMCE2-211ENST00000523549 VAX1Q5SQQ9 334 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms