RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 ERN2Q76MJ5 926 aaKnown RBP13.22□□□□□ -0.29
SYNPO-205ENST00000522122 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 PIANPQ8IYJ0 282 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 SLC22A15Q8IZD6 547 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 YIPF7Q8N8F6 280 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 SETD7Q8WTS6 366 aaKnown RBP13.22□□□□□ -0.29
SYNPO-205ENST00000522122 RHBDF1Q96CC6 855 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 VAPAQ9P0L0 249 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 IFT52Q9Y366 437 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
SYNPO-205ENST00000522122 MYADML2A6NDP7 307 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF670-ZNF695F2Z2N8 137 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 TEX28O15482 410 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ARHGDIBP52566 201 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 DHRS4L2Q6PKH6 230 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF782Q6ZMW2 699 aaPredicted RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 PIWIL3Q7Z3Z3 882 aaKnown RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 C3orf58Q8NDZ4 430 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 OR4K14Q8NGD5 310 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF689Q96CS4 500 aaPredicted RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 IRF2BPLQ9H1B7 796 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ACSL6Q9UKU0 697 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 TARM1B6A8C7 271 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 AXIN1O15169 862 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF432O94892 652 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 HRH2P25021 359 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 CCKBRP32239 447 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 SELPLGQ14242 412 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF627Q7L945 461 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 GID4Q8IVV7 300 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZFP90Q8TF47 636 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 APIPQ96GX9 242 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 F2RL3Q96RI0 385 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 IL26Q9NPH9 171 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 CENPMQ9NSP4 180 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 NRXN2Q9P2S2 1712 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 UPK1BO75841 260 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 PAK4O96013 591 aaPredicted RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 MLLT10P55197 1068 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 DCP2Q8IU60 420 aaKnown RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ARMC10Q8N2F6 343 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF431Q8TF32 576 aaPredicted RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 IL17FQ96PD4 163 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 SECISBP2Q96T21 854 aaKnown RBP13.21□□□□□ -0.29
SYNPO-205ENST00000522122 EPYCQ99645 322 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 XKR8Q9H6D3 395 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 EXTL2Q9UBQ6 330 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 ACTL7AQ9Y615 435 aa13.21□□□□□ -0.29
SYNPO-205ENST00000522122 SLC35F4A4IF30 521 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 FLRT2O43155 660 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 RFPL2O75678 378 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 ASGR2P07307 311 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 OR3A3P47888 321 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 OR3A2P47893 321 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 METTL2BQ6P1Q9 378 aaKnown RBP13.21□□□□□ -0.3
SYNPO-205ENST00000522122 LHFPL3Q86UP9 236 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 SLC5A8Q8N695 610 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 OR52N2Q8NGI0 321 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 COQ8BQ96D53 544 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.3
SYNPO-205ENST00000522122 GNG8Q9UK08 70 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 CNTRLQ7Z7A1 2325 aa13.21□□□□□ -0.3
SYNPO-205ENST00000522122 SOBPA7XYQ1 873 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 TSPAN4O14817 238 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 PCDHGA12O60330 932 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 TCEA1P23193 301 aaKnown RBP13.2□□□□□ -0.3
SYNPO-205ENST00000522122 NXPE4Q6UWF7 544 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 B3GNT8Q7Z7M8 397 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 MDGA1Q8NFP4 955 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 TLR9Q9NR96 1032 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 TAS2R10Q9NYW0 307 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 SLAMF8Q9P0V8 285 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 COL11A2P13942 1736 aaPredicted RBP13.2□□□□□ -0.3
SYNPO-205ENST00000522122 A8MV72 311 aaPredicted RBP13.2□□□□□ -0.3
SYNPO-205ENST00000522122 WRBO00258 174 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 OXSR1O95747 527 aaPredicted RBP13.2□□□□□ -0.3
SYNPO-205ENST00000522122 AP2S1P53680 142 aaPredicted RBP13.2□□□□□ -0.3
SYNPO-205ENST00000522122 CXCR4P61073 352 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 SCRN3Q0VDG4 424 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 TEX26Q8N6G2 289 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 DENND6BQ8NEG7 585 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 OR2L5Q8NG80 312 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 OR6Q1Q8NGQ2 317 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 OR2AJ1Q8NGZ0 328 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 LRR1Q96L50 414 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 GPR83Q9NYM4 423 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
SYNPO-205ENST00000522122 MAGED1Q9Y5V3 778 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms