RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 KIAA1191Q96A73 305 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 FAR2Q96K12 515 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 BIRC8Q96P09 236 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 INSM2Q96T92 566 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 GPR21Q99679 349 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 ADGRE3Q9BY15 652 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 DERL2Q9GZP9 239 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 TFB2MQ9H5Q4 396 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 EML4Q9HC35 981 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 TRIM39Q9HCM9 518 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 ANKRD10Q9NXR5 420 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 PSMD13Q9UNM6 376 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 ZNF711Q9Y462 761 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 TRAF6Q9Y4K3 522 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 LRRC42Q9Y546 428 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 DSCAMO60469 2012 aa6.81□□□□□ -1.32
CTNNA1-227ENST00000521387 IGHV1-45A0A0A0MS14 117 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 GSAPA4D1B5 854 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CFAP99D6REC4 459 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 H7C0S8 307 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 PPP6CO00743 305 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 AIM2O14862 343 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 KMOO15229 486 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 SLC22A2O15244 555 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 SOCS5O75159 536 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 NIPSNAP2O75323 286 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 MTX2O75431 263 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 NEURL1O76050 574 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CDK14O94921 469 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ALX3O95076 343 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 PGRP06401 933 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 RPSAP08865 295 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 MTHFD1P11586 935 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ZNF24P17028 368 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ALAS2P22557 587 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 PTDSS1P48651 473 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ERFP50548 548 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ACTR3P61158 418 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 HERVK_113P63132 956 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 SLC34A1Q06495 639 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 KLC1Q07866 573 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 GALNT1Q10472 559 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 TBL3Q12788 808 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CYLC2Q14093 348 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CCNIQ14094 377 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 HERC3Q15034 1050 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 OR1C1Q15619 314 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 TRMT5Q32P41 509 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 UGT3A2Q3SY77 523 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 GXYLT1Q4G148 440 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 GPRC6AQ5T6X5 926 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ARMC12Q5T9G4 340 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 LCE3BQ5TA77 95 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CLEC6AQ6EIG7 209 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CYHR1Q6ZMK1 362 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 GK5Q6ZS86 529 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 TAS2R42Q7RTR8 314 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 LRRTM4Q86VH4 590 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 BEND7Q8N7W2 519 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 OR4E2Q8NGC2 313 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CEP70Q8NHQ1 597 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 RP9Q8TA86 221 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 RHEBL1Q8TAI7 183 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 RNASE6Q93091 150 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 RCN3Q96D15 328 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 C1orf159Q96HA4 380 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 C3orf30Q96M34 536 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ZNF570Q96NI8 536 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 NSUN5Q96P11 429 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 ERVK-6Q9BXR3 956 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 GPR63Q9BZJ6 419 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 CCDC68Q9H2F9 335 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 MEAF6Q9HAF1 191 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 MAGEE1Q9HCI5 957 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 PNPLA3Q9NST1 481 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 TAS2R13Q9NYV9 303 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 HACD3Q9P035 362 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 STX18Q9P2W9 335 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 PACSIN3Q9UKS6 424 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 HYDINQ4G0P3 5121 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 RYR2Q92736 4967 aa6.8□□□□□ -1.32
CTNNA1-227ENST00000521387 MED12Q93074 2177 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 A0A1W2PQ67 120 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 NPEPPSL1A6NEC2 478 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 TUBAL3A6NHL2 446 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 IQCF5A8MTL0 148 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 SUPT3HB4E1H0 165 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 GAPDHSO14556 408 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 GPR39O43194 453 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 KERAO60938 352 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 VPS26AO75436 327 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 SUPT3HO75486 399 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 CLDN7O95471 211 aa6.79□□□□□ -1.32
CTNNA1-227ENST00000521387 TP53P04637 393 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms