RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 GPR55Q9Y2T6 319 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-221ENST00000520339 TRBV11-1A0A0K0K1C0 115 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 NCF1BA6NI72 391 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 TMEM200CA6NKL6 621 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 NCF1CA8MVU1 366 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 CLDN4O14493 209 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 FCHO1O14526 889 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 EIF3HO15372 352 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PHGDHO43175 533 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ERI3O43414 337 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 B3GALT2O43825 422 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PRKNO60260 465 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 STK16O75716 305 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ZFAND5O76080 213 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 F13BP05160 661 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 SNRPB2P08579 225 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 CCDC166P0CW27 439 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 NCF1P14598 390 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 CD1DP15813 335 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ZNF24P17028 368 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 EPORP19235 508 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 CD22P20273 847 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 CALRP27797 417 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 SSTR1P30872 391 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 KCNC1P48547 511 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 HSPA7P48741 367 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 MEOX1P50221 254 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PLA2G16P53816 162 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 SLC12A2P55011 1212 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 LIM2P55344 173 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 HSD17B7P56937 341 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ATP6V0D1P61421 351 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 OR4D1Q15615 310 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ZKSCAN8Q15776 578 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 FBXO48Q5FWF7 155 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 SULT1C3Q6IMI6 304 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ADNP2Q6IQ32 1131 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 C22orf34Q6ZV56 151 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 MDGA2Q7Z553 956 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ZNF595Q8IYB9 648 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 OR2L5Q8NG80 312 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 C16orf52Q8NHV5 167 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PIWIL2Q8TC59 973 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 AGAP11Q8TF27 550 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PHF10Q8WUB8 498 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 CCT6BQ92526 530 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 NCLNQ969V3 563 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 KIAA1191Q96A73 305 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ESAMQ96AP7 390 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 TMEM125Q96AQ2 219 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 TSPAN17Q96FV3 270 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 VMP1Q96GC9 406 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 FAR2Q96K12 515 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 SERINC2Q96SA4 455 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 DMRTA2Q96SC8 542 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 MYCBPQ99417 103 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 GPR22Q99680 433 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 ERP44Q9BS26 406 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 REXO4Q9GZR2 422 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 SAYSD1Q9NPB0 183 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PRDM7Q9NQW5 492 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PNO1Q9NRX1 252 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 WWOXQ9NZC7 414 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 KCMF1Q9P0J7 381 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 PTBP2Q9UKA9 531 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 FBXW2Q9UKT8 454 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 KLF13Q9Y2Y9 288 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
CTNNA1-221ENST00000520339 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 A0A088AWK7 358 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 TCRBV9S1A1TA0A576 114 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 ANKDD1BA6NHY2 528 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 FAM159BA6NKW6 160 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 E9PLN8 166 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 KLRC4-KLRK1H3BQV0 150 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 C19orf84I3L1E1 186 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 PEX1O43933 1283 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 DLX3O60479 287 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 CTNSO60931 367 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 ITGA10O75578 1167 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 CLDN14O95500 239 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 COX6B1P14854 86 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 ABOP16442 354 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 TFEBP19484 476 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 ZNF10P21506 573 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 HOXC12P31275 282 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 PTGER1P34995 402 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 GP5P40197 560 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 CASP2P42575 452 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 MTTPP55157 894 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 GPX6P59796 221 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 SLC13A2Q13183 592 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 DOC2AQ14183 400 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 E2F2Q14209 437 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 TBCCQ15814 346 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 GLE1Q53GS7 698 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 CMPK2Q5EBM0 449 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 XKR6Q5GH73 641 aa8.61□□□□□ -1.03
CTNNA1-221ENST00000520339 C16orf47Q6ZP98 133 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms